Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00069 ATGAAGATCGATTATTTCAAGCAAAAGTTTCCCCATAAGTATAAACAGTTGCTCGTCAAGTTCGTTATTgtcatcttcttttttggtgTGGCTTTTCgatttctcttcttccattCTGAAGAAATTTCGCCCGTTTTAGAATCCCCTCTTCCAGAGAAGACTGAAGCTTCAGTTTCAGTTCCAGAAACCCCTGTTTCAACCGAAGTAGTCGAAAATGCAGATCAAGTGTCTCGCACAGAGAAATGTGATATTTTTAGCGGGGATTGGATCCCAAACCCGTCGGGTCCAGCTTATACTAATGAAAGCTGCAACCTCATTGAAAGTCATCAGAATTGCATGACGAATGGGCGGCCAGATAAAGGATATCTATATTGGAGGTGGAGTCCGCGAGACTGTGAGTTACCTCAGTTCGATCCTGCGAGGTTTCTCAACATCATGCGAAATAAAACCTGGGCATTAATCGGTGATTCGATACAACGCAACCATGTACAATCGTTGCTGTGCATGCTCTCAACGGTTGAACAAGCGGTCATGGTCTACCATGACGAGGAATATAAGTCCAGAACATGGCACTTCCCCACACACAACCTCACCATAGCCGTTATTTGGACTCCATTCCTTGTAGAGGCTGTTATTTTTGAAGACCAGAACGGTGTTTCATCATCTGAAGTTGAGCTGTATCTGGACAAACTCAATAATAAATGGACGGATGAATATCAAAACATAGATTACATGATTATTTCAACGGGGAAATGGTTTCTTAAATCTGCAATCTACCATGAGAATGACACTGTATTAGGCTGCCACTATTGTCCTAAGAGGAACCTCACTGAGCTGGGGTTTAATTTTGCTTATCGCAAGGCTCTCCGATTTGTCATGGATTATATAGCGTCTTCCGATCACAAAGGAGTGATCTTTTTTAGGACATCCACACCTGATCACTTTGAGAATGGGGAATGGTTCAGTGGGGGAACGTGCGATAGAAAAGCACCAGTGAAAGAAGGTGAAATGGAAATGAAGGATTTGAACAAAATTCTTCGTGACATTGAGCTTGAGGAGTTTGCAAAGGCGGCTGAAAAAGCTTCAAGAAATGGAGTCAATCTTAAACTTCTCGATGTTGCACCACTTTCACTTTTGAGGCCGGACGGGCATCCTGGTCCATACAGAGAGTTTCAGCCATTTGCCCATGACCAAAATGCTAAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCAGGGCCAATCGACTCTTGGAATGATATAATAATGGAGATGGTTTTAAACGGGTA 1289 0.4158 MKIDYFKQKFPHKYKQLLVKFVIVIFFFGVAFRFLFFHSEEISPVLESPLPEKTEASVSVPETPVSTEVVENADQVSRTEKCDIFSGDWIPNPSGPAYTNESCNLIESHQNCMTNGRPDKGYLYWRWSPRDCELPQFDPARFLNIMRNKTWALIGDSIQRNHVQSLLCMLSTVEQAVMVYHDEEYKSRTWHFPTHNLTIAVIWTPFLVEAVIFEDQNGVSSSEVELYLDKLNNKWTDEYQNIDYMIISTGKWFLKSAIYHENDTVLGCHYCPKRNLTELGFNFAYRKALRFVMDYIASSDHKGVIFFRTSTPDHFENGEWFSGGTCDRKAPVKEGEMEMKDLNKILRDIELEEFAKAAEKASRNGVNLKLLDVAPLSLLRPDGHPGPYREFQPFAHDQNAKVQNDCLHWCLPGPIDSWNDIIMEMVLNG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00069 429 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 428 IPR029962 GO:0016413
Bva08g00069 429 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 11 428 - -
Bva08g00069 429 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 134 425 IPR026057 GO:0016740
Bva08g00069 429 Coils Coil 332 352 - -
Bva08g00069 429 Pfam PMR5 N terminal Domain 80 133 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00069 Bva-Chr8 354807 359806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00069 - - gmx:100816814 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00069 08 354807 359806 Bva08g00069 08 354807 359806 ECH