Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00064 ATGGCGGAACCGCTTTTGACTCTTGATAATGGCACAACCTGCTCATCTTGGAACTTCTCTGGTACGAGACTTGCTACGGGTTCCGCCATTGGAACACTTTCCATCTTCGATTTCCGCGACCCGGCCTCCTCTTCTTCCCTTCGTTGCACCTTCAAATCTGGGGTGCATGATGGAAACATTGTGAAGGTTGTTTGGGTTCCTCCAGAATATGGTGATGCTGTTGCATGCATTCTTGCTGATGGGACTGTGTCATTGTGGGAGGAGGTTGCAGAAGATTCACAGCCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAAGCAGTTCAAGCAAAGTCTTGGATGTCCAATTTGGGATGTCTTTGACTAGTTTGAAAATGGTTGCTGCATGTTCGGATGGGCATGTGAGAGTTCATGAGCTCTTGGATCCCTTGGAACTAAAAAACTGGCAGCTGCAGGCTGAATTTCAGAATGTTATTGAGTCAGGGTCTGCATTTGGTAAGGCTTTGTGCTTGTCTGCGTCCATATCTTGGAAACCACATAACGGTCAATGCCAGGAATCAAGCTTTGTTCTTGGTTTCAATTCAAATACATCAGAGCTCAATTCTTCTAAGGTATGGGAATTTGATCAAGCTCATCAAAGATGGCTTCCAGTAGCGGAATTGGCACGGCCTGAGGGTAAGGGTGATCAGGTCTATGCGGTTGCATGGGCCCCGAATATTGGCAGGCCACACGAGACAATTGCAGTTGCAACCCACAAGGGACTTGCCATATGGCACATCGGAATGAACCCTGATCCTGATGGGAGACTCCCTGTAGAGAGAGTTGCACTACTCTCTGGTCATGAAGGCGAGGTGTGGCAGATGGAGTGGGACATGAGTGGAATGACTTTGGCTACTACAGGACATGATGGAATGGTTCGGTTATGGCAGTCTAACCTCAATGGTGTTTGGCATCAACAGGCTGCATTTGAATCCAAATCTTA 980 0.4755 MAEPLLTLDNGTTCSSWNFSGTRLATGSAIGTLSIFDFRDPASSSSLRCTFKSGVHDGNIVKVVWVPPEYGDAVACILADGTVSLWEEVAEDSQPLQWKMCKSFGSSSSKVLDVQFGMSLTSLKMVAACSDGHVRVHELLDPLELKNWQLQAEFQNVIESGSAFGKALCLSASISWKPHNGQCQESSFVLGFNSNTSELNSSKVWEFDQAHQRWLPVAELARPEGKGDQVYAVAWAPNIGRPHETIAVATHKGLAIWHIGMNPDPDGRLPVERVALLSGHEGEVWQMEWDMSGMTLATTGHDGMVRLWQSNLNGVWHQQAAFESKS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00064 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Bva08g00064 326 SUPERFAMILY WD40 repeat-like 11 310 IPR036322 GO:0005515
Bva08g00064 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 6 325 IPR037363 GO:0005198
Bva08g00064 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Bva08g00064 326 SMART WD40_4 44 87 IPR001680 GO:0005515
Bva08g00064 326 SMART WD40_4 213 258 IPR001680 GO:0005515
Bva08g00064 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Bva08g00064 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Bva08g00064 326 Gene3D - 9 325 IPR015943 GO:0005515
Bva08g00064 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Bva08g00064 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Bva08g00064 326 PANTHER NUCLEOPORIN SEH1 6 325 IPR037597 GO:1904263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00064 K14299 - gmx:100780788 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00064 08 342835 346129 Bva08g00064 08 342835 346129 ECH