Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00056 ATGGAAAAGCTTGTGAAACTCATTTGCCTTTCATCTCTGCTTCTATTTCTTTGCTTTCCATTTGCTTTCGCTGGCCATAACTACGGCCAAGCTCTAAGTAAGAGCATTCTCTTCTTTGAAGCCCAGAGATCTGGTTATCTTCCTCATACCCAGAGAGTAACATGGAGAGGTCATTCTGGTCTGCATGATGGCAAAGCTAGCGGGGTAGATCTAGTTGGTGGGTACTATGATGCAGGGGACAACGTGAAGTTCGGTCTGCCCATGGCATTCACCGTTACAATGTTGTCGTGGAGCATAATAGAATATGGGAAACAAATGGCTACTAGTGGAGAGCTTAGTCATGCCATGGACGCAGTAAAATGGGGTACTGATTACTTCATTAAAGCACACCCTCAACCATATGTTCTCTATGGAGAGGTGGGAGATGGCAACAGTGACCATTACTGCTGGCAAAGGCCAGAGGACATGAGCACCGACCGCCGGGCTTACAAGATAGATCCAAGCAACCCCGGGTCGGATCTCGCCGGAGAAACTGCTGCCGCCATGGCTGCTGCCTCCATCGTCTTCCGCCATTCCAATCCTTCGTATTCCAGTGTGCTCCTCCACCATGCCTACCAGTTATTTGAATTTGCCGATAAATACAGAGGAAAGTATGACAGCAGCATTAGTGTAGCTCAGAAGTATTACAGATCCGTGAGTGGCTACGATGACGAATTGCTGTGGGCTGCTGCGTGGTTATATCAAGCAAGTAATGATAACTATTACTTGGATTACCTTGGAAGAAACGGCGACTCCATGGGTGGAACTGGTTGGTCCATGACCGAATTTGGTTGGGACGTTAAGTATGCTGGGGTTCAGACTTTGGTCGCCAAGTTTCTGATGCAGGGCAAAGCTGGTCATCGTGCACCAGTGTTCGAGAGGTACCAGCAGAAGGCAGAGTCTTTCATGTGTTCCTGCCTCGGAAGGGGATCACGCAATGTTCAGAAGACTCCCGGTGGCCTCATATTCCGCCAAAGATGGAACAACATGCAGTTTGTCACTAGCGCCTCCTTCCTCGCCACTGTCTACTCTGACTACCTTGCTTCTTCTGCTAGATACTTGAAATGTGCTTCTGGTTATGTCGCTCCAGCTCAGCTTCTCTCCCTTGCAAAATCTCAGGTGGACTACATTCTTGGAGACAACCCAAGAGCTACAAGTTATATGGTGGGTTATGGAAGCAACTTCCCTCAAAGAGTTCACCACCGAGCTTCCTCAATTGTTTCCGTCAAGGTCAATCCAACATTTGTCAGCTGCCGTGGAGGTTATGCTACTTGGTATAGTAGGAAAGGAAGCGACCCCAATCTACTTACTGGTGCTGTTGTTGGGGGACCTGATGCATATGACAACTTTGCTGATGAAAGAGATAATTATGAGCAGACAGAACCAGCAACTTACAACAATGCTCCTCTTATTGGTGTGCTGGCACGGCTAAACGCTGGCCGTGGTGGCTATAACCAGCTCCTTCCAGTTGCTATTCCATCTCCCAAGCCCCAGCCAGCCACAAAACCCAAGACGAGTCCAACATCAGCTTCATCTTGGAGTCCAATTTCcattcaacaaaaattgaCAAGCTCATGGGTCGCCGATGGAAAAACCTATTACAGATACTCAACTATAGTAACCAACAAGTCTGGCAAGACTCTCAAGTCTCTCAATCTCTCAATATCTAAACTTTTTGGTCCACTCTGGGGCCTCACCAAGTCTGCTGATTCCTACACTTTCCCATCATGGCTCAACTCTTTACCAGCTGGTAAAAGCCTTGAATTTGTCTACATTCATTCTGCGTCTCAAGCAGATGTCTCAGTCGCGAACTACTTGTTGGCCTG 1865 0.4751 MEKLVKLICLSSLLLFLCFPFAFAGHNYGQALSKSILFFEAQRSGYLPHTQRVTWRGHSGLHDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWSIIEYGKQMATSGELSHAMDAVKWGTDYFIKAHPQPYVLYGEVGDGNSDHYCWQRPEDMSTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSNPSYSSVLLHHAYQLFEFADKYRGKYDSSISVAQKYYRSVSGYDDELLWAAAWLYQASNDNYYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGHRAPVFERYQQKAESFMCSCLGRGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSARYLKCASGYVAPAQLLSLAKSQVDYILGDNPRATSYMVGYGSNFPQRVHHRASSIVSVKVNPTFVSCRGGYATWYSRKGSDPNLLTGAVVGGPDAYDNFADERDNYEQTEPATYNNAPLIGVLARLNAGRGGYNQLLPVAIPSPKPQPATKPKTSPTSASSWSPISIQQKLTSSWVADGKTYYRYSTIVTNKSGKTLKSLNLSISKLFGPLWGLTKSADSYTFPSWLNSLPAGKSLEFVYIHSASQADVSVANYLLA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00056 621 MobiDBLite consensus disorder prediction 504 526 - -
Bva08g00056 621 PANTHER ENDOGLUCANASE 4 568 - -
Bva08g00056 621 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Bva08g00056 621 SUPERFAMILY Six-hairpin glycosidases 25 503 IPR008928 GO:0005975
Bva08g00056 621 Gene3D - 25 493 IPR012341 GO:0005975
Bva08g00056 621 PANTHER ENDO-1,4-BETA-GLUCANASE 4 568 - -
Bva08g00056 621 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Bva08g00056 621 SMART CBM49_2 529 609 IPR019028 GO:0030246
Bva08g00056 621 Pfam Carbohydrate binding domain CBM49 529 606 IPR019028 GO:0030246
Bva08g00056 621 Pfam Glycosyl hydrolase family 9 28 487 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00056 Bva-Chr8 306319 311038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00056 18 621 Glycoside Hydrolase AT1G64390 78.618 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00056 K01179 - gmx:100801949 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00056 08 306319 311038 Bva08g00056 08 306319 311038 ECH