Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00052 ATGGAGAGAGGGAGTGATCCGACGCAGAAGAAATATGTCTTTGAAGTAGAGAAAGCAAAGGAGGCGAGGGACGGGAGGCCATCGGTAGGACCTGTGTACCGCAGCCTTTTCGCAAAGGATGGATTTCCTGCTACTGTTGAAGGTCTCGATAGTTGCTGGGATGTCTTCCGCATGTCTGTTGAGAAAAATCCACAAAATCCAATGCTTGGTCGCCGGGAAATTGTGAATGGGAAGCCTGGCAAGTACAAGTggcaaaattacaaagaaatatatgacTTGGTAATGAAAATTGGAAACTCTATCCGCCGTTGTGGTTACGAGGAAGGTGTAAAATGCGGCATCTATGGTGCCAATTGCCCAGAGTGGATTATAAGCATGGAGGCCTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACTTTAGGTGCTGGGGCagtggaatttattatatgccATGCAGAAGTCTCAATTGCATttgcagaagaaaagaaaattcccgAGCTATTAAAATCACTTCCAAATGCATCTAAGTATCTCAGGACACTTGTGAGCTTCGGGAAGGTTACACCTGAACAAAAGCaagaagtgaagaaatttGGTTTGGCAATATATTCATGGGATGAATTCTTACAAGTGGGTTATGATCAGAATTTTGATCTTcctgtaaaaaagaaaactgacaTCTGTACAATAATGTATACTAGTGGAACAACCGGTGACCCCAAGGGAGTGTTGATATCCAATGAGAATATCATTACGCTCTTAGCTGGGGTTAAGCGATTGTTGGAGAGTGTAAATGAACAATTGACTGATAAGGACGTATACCTTTCATATCTTCCCCTTGCACATATATTTGACAGGGTCATTGAGGAGCTATTTATATGGCATGGTGCCTCAATAGGTTTTTGGCGTGGGGatgtcaaattattaattgaagaCATTGGGGAGTTAAAACCATCTATTTTCTGTGCTGTTCCCCGTGTGCTTGAGAGAGTGAATTCAGGTTTGACACAGAAGATTTCATCTGGAGGGTTCTTAAAGCAGACAATGTTCAATTTCGCATACTCATACAAGTTGCATAACATGAAGAAGGGATATAAGCATGGAGAAGCAGCTCCACTTTGTGATAGAATTGTGTTTAATAAGGTAAAGCGAGGTTTGGGGGGTAATGTCCGTTTAATTCTGTCTGGAGCAGCACCTCTATCTACAGATGTAGAAGGTTTCCTACGAGTGGTGGCATGTGCTCACGTCCTACAAGGATATGgtcTGACTGAAACATGTGCGGGGTCCTTTGTCTCATTACCAAATGAACTGGCAATGCTTGGTACGGTGGGCCCTCCTGTGCCAAATGTGGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATACGATGCCCTCTCAAGCACACCAAGAGGAGAAATTTGTATAAAGGGAAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACTAAAGAGGTCTTGATTGATGGCTGGTTCCATACAGGGGATATTGGAGAATGGCAACCTGATGGAAGCATGAAAATTATTGACCgaaagaagaatatatttaagCTTTCACAAGGAGAATATGTTGCTGTTGAAAATCTGGAGAATATTTATGGTTCTGTTTCTGCTATAGATTCTATATGGGTTTATGGAAACAGCTTCGAGTCCTTCCTCGTTGCTGTTGTTAACCCCAACAAGCAAGTACTTGAAAATTGGGCACGAGAGAATGATATAACGGGAGACTTCGATTCTCTCTGTGAAACTGATAGGGTAAAAGATTACATACGTGGAGAGCTTACAAAGatttcaaaggaaaagaagTTGAaaggttttgaatttataaaagcaGTTCATATTGACCCGGTGCCGTTTGACATAGAGCGTGACCTTATCACTCCAACTTATAAGAAGAAGAGGCCTCAGTTACTTAAATACTACCAGAATGTCATTGACAAGATGTACGAGAGTGGAAGCAATTCCAGAGCCTG 2006 0.3908 MERGSDPTQKKYVFEVEKAKEARDGRPSVGPVYRSLFAKDGFPATVEGLDSCWDVFRMSVEKNPQNPMLGRREIVNGKPGKYKWQNYKEIYDLVMKIGNSIRRCGYEEGVKCGIYGANCPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEKKIPELLKSLPNASKYLRTLVSFGKVTPEQKQEVKKFGLAIYSWDEFLQVGYDQNFDLPVKKKTDICTIMYTSGTTGDPKGVLISNENIITLLAGVKRLLESVNEQLTDKDVYLSYLPLAHIFDRVIEELFIWHGASIGFWRGDVKLLIEDIGELKPSIFCAVPRVLERVNSGLTQKISSGGFLKQTMFNFAYSYKLHNMKKGYKHGEAAPLCDRIVFNKVKRGLGGNVRLILSGAAPLSTDVEGFLRVVACAHVLQGYGLTETCAGSFVSLPNELAMLGTVGPPVPNVDVCLESVPEMGYDALSSTPRGEICIKGKTLFSGYYKREDLTKEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGSVSAIDSIWVYGNSFESFLVAVVNPNKQVLENWARENDITGDFDSLCETDRVKDYIRGELTKISKEKKLKGFEFIKAVHIDPVPFDIERDLITPTYKKKRPQLLKYYQNVIDKMYESGSNSRA 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00052 668 Pfam AMP-binding enzyme 60 530 IPR000873 -
Bva08g00052 668 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Bva08g00052 668 CDD LC-FACS_euk 80 660 IPR045311 GO:0004467|GO:0006631
Bva08g00052 668 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 663 - -
Bva08g00052 668 SUPERFAMILY Acetyl-CoA synthetase-like 49 661 - -
Bva08g00052 668 Gene3D - 46 522 IPR042099 -
Bva08g00052 668 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 11 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00052 Bva-Chr8 291078 298560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00052 9 662 Acyl Lipid Metabolism Gene Families AT4G23850 75.688 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00052 K01897 - gmx:100814965 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00052 08 291078 298560 Bva08g00052 08 291078 298560 BWGD
Bva08g00052 08 291078 298560 Bva08g00052 08 291078 298560 ECH