Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00041 ATGGCCAAGCCTCAGAGGCCCTCTGGGCGCACGAACCTGGCCTCCTGTATTGTGGCCACAATCTTCTTGATTTTTGTTGTCATAATCGTTTTCATAGTTTACTTCACAGTGTTTAAGCCTCAAGACCCCAAAATCGCCGTCAATGCTGTCCAGCTTCCCTCATTCTCCGTTGCTAACGGCACCGTTAATTTCATCTTCTCCCAATACGCCTCCGTCAGAAATCCCAACAGAGCCGCCTTTTCCCACTACGATAGCTCCCTCCAGCTTCTCTACTCCGGTAACCAGGTTGGCTTCATGTTCATCCCCGCCGGCAACATCGACGCCGGAAGAACACAATACATGGCGGCGACTTTTTCCGTGCAGTCGTTTCCATTGTCGACGCCGACGAACTCGGGCCCTACCTTGAGTAACGATGCGGTTAATGGTTTAAGGATGGGACCGACGTTAGAGATCGAGTCGAGGATGGAGATGGCGGGCAGGGTCAAGGTGTTGCATTTCTTCAGTCACCACGTGGAGGCCAAAGCCGGATGCAGAGTGGCTATTGCCGTCAGCGATGGATCTGTCTTAGGTTTCCACTGCTA 581 0.525 MAKPQRPSGRTNLASCIVATIFLIFVVIIVFIVYFTVFKPQDPKIAVNAVQLPSFSVANGTVNFIFSQYASVRNPNRAAFSHYDSSLQLLYSGNQVGFMFIPAGNIDAGRTQYMAATFSVQSFPLSTPTNSGPTLSNDAVNGLRMGPTLEIESRMEMAGRVKVLHFFSHHVEAKAGCRVAIAVSDGSVLGFHC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00041 193 Pfam Late embryogenesis abundant protein 71 174 IPR004864 -
Bva08g00041 193 SUPERFAMILY LEA14-like 24 122 - -
Bva08g00041 193 PANTHER OS05G0238400 PROTEIN 5 193 - -
Bva08g00041 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00041 Bva-Chr8 231117 231944 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00041 - - gmx:100782341 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00041 08 231117 231944 Bva08g00041 08 231117 231944 BWGD
Bva08g00041 08 231117 231944 Bva08g00041 08 231117 231944 ECH