Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00039 ATGGTAGTCACTATTCTTGTTTCACTCATCTATGTCGTGATCTCTTCTTTGTGTCCAGAATCAGGAGCTCTCCCTCAAGAACTATACAGCATCTCAATTTCACCTTCAATGTCTCCCTCATCAGCTACGCCTATGCCTGTGACTATTCAGGAAAATCCTCCTCTTTCTCCAGCCATGTTCGTCATAGGTGATTCCTCAGTTGATGCCGGAACCAACAATTTTCTAGGTACTTTTGCCCGCGCCAACCACCTTCCATATGGAAGAGATTTCGACACGCACCAACCAACGGGCCGATTCTGCAACGGGAGAATCCCCGTTGATTATCTTGcaCTGCGTCTTGGTATTCCCTTTGTTCCGAGTTATCTTGGGCTGACGGGAGCCATGGAGGATATGATTCATGGGGTAAATTACGCTTCTGCTGGCGCCGGCGTTATATTCTCCAGTGGTTCAGAATTGGGTCAGCATATTTCCTTCACTCAGCAAATTCAGCAGTTTGCAGACACTCTGCAGCAGTTTATAATAAGAATGGGCGAGGCTGCTGCAACCAGTCTCGTATCCAACTCTGtattttacatttctattgGAATCAACGACTACATTCACTACTATTTGCTAAATGTCTCTAACGTGGAAAATTTGTTCCTGCCATGGAGTTTCAACCAGTTTTTAGCCTCCTCGGTGAGGCAAGGGATAAAGCACTTGTACAACATCTATGCAAGGAAAGTGGTGGTCTCGGGACTTGCACCTATTGGCTGTGCCCCTAACTATTTGTGGCTGTATGGTAGTGAAAACGGAGAGTGTGTTGAGCAGATAAATGACATGGTGAGGGAGTTTAATTTTGTCATGAGATACATGATTAAAAAGCTTGCTGAGGAGCACTCTGATCTCAATATCACTTTCTGTGATGTATTTGAAGGTTCCATGGATATTCTAAAGAATCATGAACGTTatgGTTTTAACGTCACCACTGAGGCATGCTGTGGATTTGGGAAGTACAAGGGCTTGATCATCTGCTTATCACCAGAAATGGCATGTACTGATGCCTCCAACCATATCTGGTGGGACCAGTTTCATCCCACTGATGCAGTGAATGCAATTCTGGCAGACAATATATGGAATGGTCTGCATACTAACATGTGTTATCCTATGAACATGGAGGACATGGTAATTCAGAAAGCCGAACGATCTTG 1190 0.4395 MVVTILVSLIYVVISSLCPESGALPQELYSISISPSMSPSSATPMPVTIQENPPLSPAMFVIGDSSVDAGTNNFLGTFARANHLPYGRDFDTHQPTGRFCNGRIPVDYLALRLGIPFVPSYLGLTGAMEDMIHGVNYASAGAGVIFSSGSELGQHISFTQQIQQFADTLQQFIIRMGEAAATSLVSNSVFYISIGINDYIHYYLLNVSNVENLFLPWSFNQFLASSVRQGIKHLYNIYARKVVVSGLAPIGCAPNYLWLYGSENGECVEQINDMVREFNFVMRYMIKKLAEEHSDLNITFCDVFEGSMDILKNHERYGFNVTTEACCGFGKYKGLIICLSPEMACTDASNHIWWDQFHPTDAVNAILADNIWNGLHTNMCYPMNMEDMVIQKAERS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00039 396 PANTHER OS02G0290900 PROTEIN 25 390 - -
Bva08g00039 396 CDD SGNH_plant_lipase_like 57 374 IPR035669 -
Bva08g00039 396 Pfam GDSL-like Lipase/Acylhydrolase 60 370 IPR001087 GO:0016788
Bva08g00039 396 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 25 390 - -
Bva08g00039 396 Gene3D SGNH hydrolase 50 379 IPR036514 -
Bva08g00039 396 SUPERFAMILY SGNH hydrolase 170 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00039 Bva-Chr8 223926 225873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00039 3 389 Acyl Lipid Metabolism Gene Families AT4G10950 63.660 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00039 - - jre:108993747 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00039 08 223926 225873 Bva08g00039 08 223926 225873 ECH