LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva08g00031	ATGGCGTCGTCTTTACATAATTCAGCTCcaatttcatcttcttttgctCTCGACATTCCATATTGccccaaaattttctctacCTACCCATGTTGTCCAATCATCAGGTTTGCAAAAACAAGATCCATCTtttacagaaagaaaaacaatactGAATTTTCCGTCAAAGCACAAACCCTGGACTTCTCGGCTTCCTTTTTTGAAGGAGGAATCGGGTCCGACGACGACCTTACCTCTCCCGGAAGGGGGTTTACAGCCGTAGACGAGAAGGAGGAACCACAATGTCCGCCTGGACTCAGACACTACGAGACAATGGCGGTTCTAAGACCTGACATGTCTGAGGATAAGCGACTCGCACTGACCCAGAGATACGAGGAGCTGCTTGTTGCTGGAGGTGGCATGTACTTAGAGGTTTTTAACAGAGGAGTTATCCCACTAGCATATAGcatcaagaagaaaaacaaggcCGGGGAGACCAACAATTATTTGGATGGCATCTACCTCCTCTTCACATACTTTACGAAGCCCGAGTCCATGGGCATTCTTGAGGAGACACTCAAGGCTGATGATGACGTCATCCGATCAACGAGTTTCAAGGTTAGGAAACGCAaatatta	617	0.4165	MASSLHNSAPISSSFALDIPYCPKIFSTYPCCPIIRFAKTRSIFYRKKNNTEFSVKAQTLDFSASFFEGGIGSDDDLTSPGRGFTAVDEKEEPQCPPGLRHYETMAVLRPDMSEDKRLALTQRYEELLVAGGGMYLEVFNRGVIPLAYSIKKKNKAGETNNYLDGIYLLFTYFTKPESMGILEETLKADDDVIRSTSFKVRKRKY	205

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva08g00031	205	Pfam	Ribosomal protein S6	101	199	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bva08g00031	205	Gene3D	-	98	205	IPR014717	-
	Bva08g00031	205	SUPERFAMILY	Ribosomal protein S6	99	203	IPR035980	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bva08g00031	205	Hamap	30S ribosomal protein S6 [rpsF].	99	202	IPR020814	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bva08g00031	205	CDD	bS6_chloro_cyano	99	200	-	-
	Bva08g00031	205	PANTHER	30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC	10	205	-	-
	Bva08g00031	205	PANTHER	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	10	205	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva08g00031	Bva-Chr8	166557	168073	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva08g00031	K02990		-	zju:107405472	277.33

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva08g00031	08	166557	168073	Bva08g00031	08	166557	168073	ECH