Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00029 ATGCCTGGTTTGGTATCCGTCAAAACTCCACCGGACGCCCCACCCCTCCGAATCTCAGTCCCCGAATCCCAAACCCCACAGCGATTAGATTCCGGAAACCTGAAAACCCCGTCTCCGCTTCCAAAGAAACCACCTTCTCCTTCGCCGTCTCGTGCCAAACCTTCCCCGGATCGGAAAAAGAAGCCCCCTGCTCCTGATTCCCCAAACCCTGTCCTTTTGGACGCCTCCCTCGACAACCCTGATCTCGGACCCTTCCTTCTCAAGCTCGCCCGTGATACCATTGCCTCTGGTGAAGGTCCAGCCAAGGCTCTAGACTATGCCATTCGGGCCTCCAAGTCCTTCGAGCGATGCTCCGTCGATGGGGAGCCCAGCTTGGACCTTGCTATGAGTTTGCACGTCCTAGCTGCTATTTATTGTAGCTTAGCCAAGTTTGACGAGGCTGTCCATGTCCTCGAGCGGGCGATCCAGGTTCCCAATGTTTCCAGGGGTCCCGATCACGCTCTTGCCGCCTTCTCTGGTTATATGCAATTAGGGGATACCTACTCCATGCTTGGCCAAGTCGATAAGTCCATCGCCTGCTATGACCAAGGCCTCAACATTCAGATCCAAGCCTTGGGGGACACAGATCCAAGAGTTGGAGAGACTTGCAGGTACTTAGCTGAAGCTAATGTTCAAGCAATGCAATTTGATAAAGCAGAGGAATTGTGCAAGAAAACGCTTGAGATTCATCGTGCACATAGTGAACCAGCATCTCTAGAAGAAGCAGCTGACAGAAGGCTAATGGCACTTATATGTGAGGCAAAGGGAGATTTTGAATCAGCTCTTGAACATCTTGTCCTTGCCAGCATGGCAATGATTGCAAATGGACAAGACAATGAAGTTGCTGCTATTGATGTCAGTATTGGAAACATTTACATGTCATTGTGTCGCTTTGATGAAGCTATCTTCTCCTACCAGAAGGCACTTACTGTTTTCAAATCATCAAAGGGAGAAAACCATCCTTCAGTTGCATCTGTTTTTGTGCGCCTTGCTGATTTGTATCACAGGACTGGAAAACTGAGAGAGTCCAAATCCTATTGCGAAAATGCTTTGAGAATATACTCAAAGCCGGTGCCCGGAACCACTGCAGAGGAGATTGCTGGTGGGTTGACGGAAGTTTCTGCTATTTTTGAATCTGTACATGAGCCTGAGGAGGCACTGAAATTGTTGCAGAAGGCTATGAAGTTATTGGAGGATAAACCAGGGCAGCAGAGCACAATTGCAGGAATAGAAGCACGAATGGGTGTGATGTTTTACATGATTGGAAGGTATGAAGAAGCAAGAAACTCTTTCGAAAGTGCAGTAGCAAAACTAAGAGTCAGTGGGGAGAGGAAGTCTGCGTTCTTTGGAGTTGTTCTGAACCAGATGGGATTGGCATGTGTACAGTTGTTCAAGATAGATGAGGCTGCTGAGTTATTTGAAGAAGCTAGAGGAATTCTTGAACAGGAGTGCGGCCCATGCCATCAAGATACTCTTGGAGTATATAGCAACCTCGCAGCAACTTATGATGCAATGGGAAGAGTGGGAGATGCAATTGAGATCTTGGAATATGTTCTGAAATTGAGGGAAGAAAAGCTTGGGATAGCAAATCCTGACTTTGAAGACGAGAAGCGAAGACTAGCTGAGCTGCTGAAAGAAGCAGGCAAGACACGAGACAGAAAAGCAAAATCTCTGGAAAACCTTATTGATCCCAGCTCGAGAAGGACAAAGAAGGAGGGGACAAAGAGGTGGCCTGGCTtgggttttagaattta 1793 0.4752 MPGLVSVKTPPDAPPLRISVPESQTPQRLDSGNLKTPSPLPKKPPSPSPSRAKPSPDRKKKPPAPDSPNPVLLDASLDNPDLGPFLLKLARDTIASGEGPAKALDYAIRASKSFERCSVDGEPSLDLAMSLHVLAAIYCSLAKFDEAVHVLERAIQVPNVSRGPDHALAAFSGYMQLGDTYSMLGQVDKSIACYDQGLNIQIQALGDTDPRVGETCRYLAEANVQAMQFDKAEELCKKTLEIHRAHSEPASLEEAADRRLMALICEAKGDFESALEHLVLASMAMIANGQDNEVAAIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIAGGLTEVSAIFESVHEPEEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMFYMIGRYEEARNSFESAVAKLRVSGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPSSRRTKKEGTKRWPGLGFRI 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00029 597 PANTHER - 1 596 - -
Bva08g00029 597 SMART tpr_5 295 328 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 505 538 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 380 413 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 213 246 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 463 496 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 128 161 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 171 204 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 421 454 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 255 288 IPR019734 GO:0005515
Bva08g00029 597 SMART tpr_5 337 370 IPR019734 GO:0005515
Bva08g00029 597 MobiDBLite consensus disorder prediction 562 597 - -
Bva08g00029 597 SUPERFAMILY TPR-like 423 563 IPR011990 GO:0005515
Bva08g00029 597 Gene3D Tetratricopeptide repeat domain 73 280 IPR011990 GO:0005515
Bva08g00029 597 MobiDBLite consensus disorder prediction 1 75 - -
Bva08g00029 597 Pfam MalT-like TPR region 133 279 IPR041617 -
Bva08g00029 597 Gene3D Tetratricopeptide repeat domain 281 460 IPR011990 GO:0005515
Bva08g00029 597 MobiDBLite consensus disorder prediction 20 34 - -
Bva08g00029 597 MobiDBLite consensus disorder prediction 562 591 - -
Bva08g00029 597 Pfam Tetratricopeptide repeat 465 537 - -
Bva08g00029 597 Pfam Tetratricopeptide repeat 294 368 - -
Bva08g00029 597 Coils Coil 546 566 - -
Bva08g00029 597 Gene3D Tetratricopeptide repeat domain 461 574 IPR011990 GO:0005515
Bva08g00029 597 SUPERFAMILY TPR-like 174 448 IPR011990 GO:0005515
Bva08g00029 597 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 596 - -
Bva08g00029 597 MobiDBLite consensus disorder prediction 38 52 - -
Bva08g00029 597 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00029 Bva-Chr8 158936 162494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00029 128 340 Glycosyltransferase AT3G04240 25.000 1.83e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00029 - - mnt:21391217 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00029 08 158936 162494 Bva08g00029 08 158936 162494 ECH