Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00024 atgctgGAAACGGTGAAATACCTGATGGGTTCGGCAGGACCCAGCGGCTATGGCTCCAAGTCCACTGCCGAACAAGTCACCGAAAGCTGTGGCGATCTCCGCTCCATCACCGCCATCATTACCGGAGCAACATCTGGAATCGGAGGCGAAACCGCTCGAGTGTTGGCCAAGAGAGGTGCGAGGCTGATTCTACCAGCTCGAAACCCGAAAGCTGCCGAAGAAGCAAAAGCTCTCATCCTATCCGAGTGTGGCCTTGGGGACTCCCACTCTCGCATCATTGTTATGCCCCTCGATCTTAGCTCTCTCGCTTCGGTCACAAACTTCGTCGCTGACTTTCTTGCTCTCCGTTTGCCTCTCAATCTTCTCATAAACAACGCCGGAAAATTTTCACACGAACAGGCAATCTCCGAGGATGGATTTGAGATGACCTTTGCAACCAATTATCTCGGTCATTTTCTGTTGACGAAGCTGTTATTGAAGAAAATGGTTGAAACGGCAAAGGAGAGCGGAATCGAAGGGCGAATCGTGAACGTTTCTTCAAGCATACACAGCTGGCTTTCCGGCGAGATAAACCCATATTTGGGCAACAAAAGCAGCCAGTACGACGCCACGCGTGCTTATGCCGTTTCTAAGCTGGCCAACGTTTTGCACACCAAACACCTTGCCCTCGTACTCCAGCAAATGCGGGCGGACGTGACTGTAAACTGCGTTCATCCGGGTATCGTGAAGACCAGACTCACCAGAGAACGGGAAGGACTACTTACGGAATTAGGATTCTTTTTGGGCTCCAAGCTGTTGAAGACCATTCCCCagGCCGCTGCAACGACCTGTTACGTGGCGACGCATCCAAGTCTGTTGAATGTGTCGGGCAAGTACTTTGCTGACTGTAACGAAGCTTCCGCCTCAAAATTGGGATCCAACGCCGCTGAAGCTGCAAGGTTATGGTCCGCTACTCAATTTATGATTTCTAGGTGTCTCTCTCCCTG 986 0.5101 MLETVKYLMGSAGPSGYGSKSTAEQVTESCGDLRSITAIITGATSGIGGETARVLAKRGARLILPARNPKAAEEAKALILSECGLGDSHSRIIVMPLDLSSLASVTNFVADFLALRLPLNLLINNAGKFSHEQAISEDGFEMTFATNYLGHFLLTKLLLKKMVETAKESGIEGRIVNVSSSIHSWLSGEINPYLGNKSSQYDATRAYAVSKLANVLHTKHLALVLQQMRADVTVNCVHPGIVKTRLTREREGLLTELGFFLGSKLLKTIPQAAATTCYVATHPSLLNVSGKYFADCNEASASKLGSNAAEAARLWSATQFMISRCLSP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00024 328 Pfam short chain dehydrogenase 37 250 IPR002347 -
Bva08g00024 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 299 IPR036291 -
Bva08g00024 328 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 323 - -
Bva08g00024 328 PRINTS Glucose/ribitol dehydrogenase family signature 207 226 IPR002347 -
Bva08g00024 328 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Bva08g00024 328 PRINTS Glucose/ribitol dehydrogenase family signature 167 183 IPR002347 -
Bva08g00024 328 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Bva08g00024 328 PRINTS Glucose/ribitol dehydrogenase family signature 117 128 IPR002347 -
Bva08g00024 328 Gene3D - 22 325 - -
Bva08g00024 328 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 207 226 IPR002347 -
Bva08g00024 328 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 128 IPR002347 -
Bva08g00024 328 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 IPR002347 -
Bva08g00024 328 PANTHER RETINOL DEHYDROGENASE 4 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00024 Bva-Chr8 134935 136516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00024 17 295 Acyl Lipid Metabolism Gene Families AT3G46170 25.685 6.05e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00024 - - gmx:100794347 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00024 08 134935 136516 Bva08g00024 08 134935 136516 ECH