Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00013 ATGGCCGACACCAGAGCCCCCACCTTTGCTTTCCCCAACAAGAAACGCAGTACCAGCACAGATGACGATGATCGCGCGGTGGCAAAGAAATCCACGTTTTCGTGGACTGTGGACCCCGCAACCGCATTGGCTAACGCCCGCCACGAGTTCGGTGAGCATGGTGGTGTGAACATGTCCATCGAGGCCTCCGCCACCTTCACCGTCATGGAACCGGAGACCATGCGGCGCATGTTCGCCGGTGAACTTGGGCCCGATCGTGATTTTTTCATCTACAGCCGTCACTTCAACCCGACCGTGTTGAATCTGGGCCGACAGATGGCGGCCCTTGAAGGCACGGAGGCTGCGTACTGCACGGCCAGCGGTATGTCGGCCATCTCCTCGGTTCTCTTGCAGCTCTGCAGCAGCGGTGGACACGTGGTGGCTTCGAGGTCTCTATACGGTGGGACCCACTCGCTCTTTATGCACTTCCTGCCTAGGGCGTGCAACATAACGACGACGTTCGTGGACATAAAAGATTCAGAGATGGTGAAGAATGCCATGGTACAAGGGAAGACCAAGGTGCTGTACGTGGAGTCCATGTCCAACCCCACTCTCGCCGTCGCCAATATACCGGAGCTAAGTAGCTTAGCCCGTGACAAAGGAGTCACGCTCGTCGTCGACAACACCTTCGCTCCCATGGTCCTCTCACCCGCTCGTCTTGGAGCTGACGTCGTTATTCACAGTATCTCCAAGTTCATCAGCGGTGGGGCCGACATCATCGCAGGGGCTGTGTGCGGCCCAGCAAAGCTAGTGAACTCGATGATGGACATGCACCAAGGGGCCCTAATGTTGCTAGGTCCAACAATGAACCCGAAGGTGGCATTTGAACTATCAGAGAGAATCCCCCACTTGGGGCTTAGAATGAAGGAGCACTGCAAGCGTGCTTTGGTTTTCGCTACAAGGCTGAAGAAGCTAGGAATGAAGGTGGTGTATCCAGGTCTTGAAGATCACCCAGATCACGAGTTGCTGAAATCCATTGCCAACGAGGATTACGGATACGGTGGGCTCATGTGCATAGACATGGAAACGGAGGAGAGGGCTAACAGGTTGATGAACCAATTGCAAAACTATGCGCAGTTTGGTTTCATGGCGGTGAGCTTGGGTTATTACGAGACTCTCATGTCATGCTCTGGCAGCAGCACCAGCAGCGAGATGAGCGAGGAGGAAAAGGCACTCGCTGGCATATCGCCGGGTCTAGTCAGGATGTCAATTGGATACATTGGGACCTTAGAGCACAAGTGGGCTCAGCTTGAGAAGGCCATTACCAGACTCAAGAACAATTG 1322 0.5461 MADTRAPTFAFPNKKRSTSTDDDDRAVAKKSTFSWTVDPATALANARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASRSLYGGTHSLFMHFLPRACNITTTFVDIKDSEMVKNAMVQGKTKVLYVESMSNPTLAVANIPELSSLARDKGVTLVVDNTFAPMVLSPARLGADVVIHSISKFISGGADIIAGAVCGPAKLVNSMMDMHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCKRALVFATRLKKLGMKVVYPGLEDHPDHELLKSIANEDYGYGGLMCIDMETEERANRLMNQLQNYAQFGFMAVSLGYYETLMSCSGSSTSSEMSEEEKALAGISPGLVRMSIGYIGTLEHKWAQLEKAITRLKNN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00013 440 SUPERFAMILY PLP-dependent transferases 51 434 IPR015424 -
Bva08g00013 440 Gene3D - 40 294 IPR015421 GO:0003824
Bva08g00013 440 PANTHER METHIONINE GAMMA-LYASE-LIKE 12 437 - -
Bva08g00013 440 PIRSF CGS 26 438 IPR000277 GO:0019346|GO:0030170
Bva08g00013 440 Coils Coil 420 440 - -
Bva08g00013 440 Pfam Cys/Met metabolism PLP-dependent enzyme 42 418 IPR000277 GO:0019346|GO:0030170
Bva08g00013 440 MobiDBLite consensus disorder prediction 1 23 - -
Bva08g00013 440 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 12 437 IPR000277 GO:0019346|GO:0030170
Bva08g00013 440 Gene3D Aspartate Aminotransferase, domain 1 298 440 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00013 Bva-Chr8 82785 85100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00013 K01761 - tcc:18605977 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00013 08 82785 85100 Bva08g00013 08 82785 85100 ECH