Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00005 ATGACAATTACTGATTCACGTTTTCTAATTGAAAACGAAGGGAGTTGCTTACCACATCCGCCAGAGGAGGAAAATCGGATCATAGCAGAGTTGATGAAAGATTCTGAGAGTAATTTGAAAGAAGGCAACCTATACTACATTATTTCCAATAGGTGGTTTTCAAGGTGGCAGAGATATGCTGGGCCCTGTATTGGTATATTTTCGACTGATGAACAATCTTCAGATTGTCGGCAATCAAAGGTTGCTTGCTCAGAGATATCAGATCGACCTGGGCCAATTGATAATTCGGACATTGTTTCAAATGATAATGATTGGGAAGGAAATTATATAGAGATTCGTAGAATGCTGGAAGAAGGGTCAGACTATGTTCTAGTTCCTCAAAAAGTTTGGGAGAAACTGTATGAatgGTACAGTGGAGGACCACCATTACCAAGGAAGTTGATTTCACAGGGTGTtgaacataataaatataacgTTGAGGTCTACCCACTCTGTCTAAAGGTGATTGATTCCAGAGATAACAGTGAGTCAGTGATTAAACTAAGCAAAAAGGCTACTATATGCGAGCTTTATGAGATAGTATGCAAACTTAGAGGAGTAGAACAAGAAAAgGCCTGTATTTGGGATTACttcaatgagaagaaaaattcattactAATTGTCTCAGACCAGACATTGGAGGATGCGAACTTGATGATGGACCAACATATTTTTTTGGAAGTCCCACTTGATGGTGATCATTCTTCTCAGTCTGGGATGGATTCAGGGGGAAATGAGTTAGCTTTGGTACCTTTAGAACCTTCAAGATCAGCTGTGTCAATTGCAGGGGGGCCTACCTTGTCAAATGGTCATTCAATTggttctaattttaatttatatcagGGAAGTTCTTTAAATTCAGTATTGATGGATACAGATGATCGATATGATGTTTATAGAGGAGAAAAGGGTGGTTTGGCAGGGTTGCAGAACCTGGGCAATACTTGCTTCATGAATAGTGCTATTCAATGTCTAGTCCACACACCACCACTTGTTGAATATTTCTTACAAGATTACAGCGAGGAGATCAACATGGATAATCCTCTAGGAATGCGCGGTGAGCTAGCACTTGCATTTGGAGACTTGTTGAGGAAACTGTGGTCTTCGGGGCGAACTGCTGTTGCACCTCGTGTTTTCAAGGGCAAATTGGCTCGATTTGCTCCGCAATTCAGTGGTTATAACCAGCATGATTCTCAAGAATTGCTTGCCTTTTTATTGGATGGGCTGCATGAAGATTTGAATCGTGTAAAACAGAAGCCTTACATTGAAATGAAGGACTCAGATGGTAGGCCAGATACTGAAGTGGCATTTGAGTGTTGGAAAAATCATATGGCTCGGAATGATTCATTGATTGTTGATGTATGCCAAGGTCAATACAAGTCTACTCTGGTTTGTCCAGTCTGTGGCAAAATTTCAATCACTTTTGATCCCTTCATGTACTTATCATTGCCACTGCCTTCCACTGTTAGTCGGACAATGACAGTGACTGTGTTTTATGGCGATGGGAGTGGTCTTCCCATGCCCTATACTGTGAATGTTCTAAAGCATGGTTGCTGTAGAGATCTTAGTCACGCCTTGAGCACTGCATGTTGCTTGAATAATGATGAAATGCTTTTGCTTGCAGAGGTTTATGAGCATAAGATATATCGATATTTGGAGAACCCTTTAGAACCACTGGCTTCAATAAAGGATGATGAACACATTGTGGCCTATCGACTCAAAAGAGGAGAGCAGAAAACAAAACTGGAAATAATCCACCGATGGCTGGACAAATGTTCCCCTGACAATATGAAGGGTGGAGAGAGGAAGCTGTTCGGAACTCCCTTGGTTACATATTTTGGAGAAGATCCTCTATATGGAACTCACATTGAGGCAGCTGTTCATAGAATATTATCACCTTTAAGAAGAGTTTATTGTTCAAATTTGTCCCACAGTGGGAAGGAAAATGGCTTCATCTCAGTTGGCGGTGGTGAGCAATTGGCCAGTTCCAGTGCTCAATATGGATCACGAAAGCAGGCAATTGAGAGCAGAGAACAAGAAGGGACATCCAGTGGGGAGTCATCTTTTCAGCTTGTTTTAACTAATGAAAGGGGTTTGAGCTGTAATCGCATTGAAAAAGATTCTCTTATAAAACCTGGTCAACTTGTAAGAGTTTCTCTTGACTGGACTGACAAAGAGCATGAATTATATGATGCCAGCTATCTAAGGGATCTCCCCGAGGTTTACAAGACAGGATTCACTGTGAAAAAAACCCGGCAAGAAgctatttctttgttttcgtGCTTGGAGGCATTCTTGACTGAAGAACCTCTTGGGCCTGATGACATGTGGTACTGCCCTCGATGCAAGGAACACAGACAAGCTACCAAAAAGCTAGACTTGTGGAAATTGCCAGACATTCTCGTTTTTCACTTGAAGCGATTTTCATACAACAGATACCTGAAAAACAAACTTGACACTTTCGTGAATTTTCCCATTCGCAATCTTGATCTGACCAAATATGTGAAAAGCAAAGATGGACAGTCCTACGTGTATGACCTTTATGCTATCAGCAACCATTATGGCGGTTTGGGTGGTGGGCACTATACTGCATATGCTAAGTTGATCGATGAAAATAGATGGTACCATTTTGATGACAGTCATGTCTCCCCAGTTACTGAAGCAGAGATCAAGTCTTCAGCTGCATAtgtgttattttatcaaagaGCTAGAAGCAATATAAAGATGGAAGGCGAGACGTCTCATTGTCATACAAGTTCTTG 2801 0.4006 MTITDSRFLIENEGSCLPHPPEEENRIIAELMKDSESNLKEGNLYYIISNRWFSRWQRYAGPCIGIFSTDEQSSDCRQSKVACSEISDRPGPIDNSDIVSNDNDWEGNYIEIRRMLEEGSDYVLVPQKVWEKLYEWYSGGPPLPRKLISQGVEHNKYNVEVYPLCLKVIDSRDNSESVIKLSKKATICELYEIVCKLRGVEQEKACIWDYFNEKKNSLLIVSDQTLEDANLMMDQHIFLEVPLDGDHSSQSGMDSGGNELALVPLEPSRSAVSIAGGPTLSNGHSIGSNFNLYQGSSLNSVLMDTDDRYDVYRGEKGGLAGLQNLGNTCFMNSAIQCLVHTPPLVEYFLQDYSEEINMDNPLGMRGELALAFGDLLRKLWSSGRTAVAPRVFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDTEVAFECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSLPLPSTVSRTMTVTVFYGDGSGLPMPYTVNVLKHGCCRDLSHALSTACCLNNDEMLLLAEVYEHKIYRYLENPLEPLASIKDDEHIVAYRLKRGEQKTKLEIIHRWLDKCSPDNMKGGERKLFGTPLVTYFGEDPLYGTHIEAAVHRILSPLRRVYCSNLSHSGKENGFISVGGGEQLASSSAQYGSRKQAIESREQEGTSSGESSFQLVLTNERGLSCNRIEKDSLIKPGQLVRVSLDWTDKEHELYDASYLRDLPEVYKTGFTVKKTRQEAISLFSCLEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPDILVFHLKRFSYNRYLKNKLDTFVNFPIRNLDLTKYVKSKDGQSYVYDLYAISNHYGGLGGGHYTAYAKLIDENRWYHFDDSHVSPVTEAEIKSSAAYVLFYQRARSNIKMEGETSHCHTSS 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00005 933 Gene3D Cysteine proteinases 648 923 - -
Bva08g00005 933 Gene3D - 162 249 - -
Bva08g00005 933 CDD Peptidase_C19R 762 914 - -
Bva08g00005 933 MobiDBLite consensus disorder prediction 678 701 - -
Bva08g00005 933 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 321 336 IPR018200 GO:0004843|GO:0006511
Bva08g00005 933 ProSiteProfiles DUSP domain profile. 19 148 IPR006615 GO:0004843
Bva08g00005 933 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 924 - -
Bva08g00005 933 Pfam DUSP domain 43 148 IPR006615 GO:0004843
Bva08g00005 933 SUPERFAMILY DUSP-like 17 148 IPR035927 -
Bva08g00005 933 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED 15 924 - -
Bva08g00005 933 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 858 875 IPR018200 GO:0004843|GO:0006511
Bva08g00005 933 SMART dusp 38 151 IPR006615 GO:0004843
Bva08g00005 933 Gene3D - 8 161 IPR035927 -
Bva08g00005 933 Pfam Ubiquitin carboxyl-terminal hydrolase 321 913 IPR001394 GO:0004843|GO:0016579
Bva08g00005 933 Gene3D Cysteine proteinases 307 515 - -
Bva08g00005 933 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 320 916 IPR028889 -
Bva08g00005 933 SUPERFAMILY Cysteine proteinases 318 915 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00005 Bva-Chr8 33564 41958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00005 767 933 Miscellaneous Gene Families AT4G31670 36.872 4.39e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00005 - - gmx:100786678 1510.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00005 08 33564 41958 Bva08g00005 08 33564 41958 ECH