Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02566 ATGATTGAGACAAATTGTGCCACATATAAGTCAGTGCCACCTCCCACGATTATTCTCTTAATGAGGATGAAGGCTCTGCTGTTGGCGTTTGTTGTCCTCGTGATATGCCTCTGCGATTGTGCTCTGAGTAGGAAGGAGTGTACAAACACTGTTACTGCATCTCACAGTTTTCGATACGAGTTATTAACATCTACAAACGAAACATGGAAAGCTCAGGTGATGTCGCATTATCATTTGACGCCAACTGATGAATCCACCTGGGGAAATTTACTACCGAGGAAGTTCTTGAAGGAAGAACAACAGCATGATTGGGCTTTCTTGTATAGGACGATTAAAAATATGGGTGTGTTTAAGGCACCTCAAGGTTTTCTCAAAGAGGTTTCTCTTCATGATGTGAGATTGCATAATGATTCAATCCATGGTCGGGCGCAGCAGACAAATTTGGAGTATCTGTTGATGTTAGACGTGGACAGATTGGTTTGGAGTTTTAGAAAGACTGCTGGTCTGCCAACGCCTGGGACACCCTATGGAGGCTGGGAGGCACCACAATCTGAGCTCCGGGGTCATTTTGTTGgaCATTACTTGAGTGCATCAGCTCAAATGTGGGCCAGCACTCACAACGGTAGcttgaaggagaaaatgtcTGCTCTTGTAACCGCCCTCTCTGCCTGTCAGGAGAAAATTGGCACAGGATATCTCTCTGCATTTCCATCTGAATTTTTTGATCGATTTGAAGCTGTTCAGCCTGTGTGGGCTCCCTATTACACAATTCACAAGATCTTGGCTGGCCTTTTGGATCAACACATGCTAGCTGGAAACCCTCAAGCACTAAAAATGGTCACATGGATGGTTGACTACTTTTACAACCGTGTGCAGAATGTTATCACTAAGTACACTATAAATAGGCACTATCAGTCACTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACAGCTTAACGGGAGATGCAAAGCATCTGTTGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGTTACTTGCAGTGCAGGCTAATGACATAGCTGATTTTCATGCTAATACACATATCCCCGTTGTTATTGGATCGCAAATGCGGTATGAAGTCACTGGTGATCCATTTTATAAGgaaaTTGGAACATTCTTTATGGATCTCGTTAACTCTTCTCACAGTTATGCAACTGGAGGGACATCCGTTAGTGAGTTCTGGAGTAATCCAAAGAGGATAGCAGACAACCTGCAGACAACAGAGAATGAAGAATCATGCACAACTTATAACATGTTGAAGGTTTCCCGCCACCTTTTTAGATGGACCAAAGAGGTATCATACGCAGATTATTATGAGCGTGCCTTAACAAATGGTGTGTTAAGCATCCAGAGAGGAACAGATCCTGGAGTCATGATATATATGCTCCCTTTAGGCCGTGGGGTTTCTAAGGCTAAATCTTACCATAGCTGGGGAACAAAGTTTGACGATTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTCGGGGATTCCATCTACTTTGAAGAAGAAGGGAAAGATCCATCTCTTTACATCATTCAGTACATATCAAGCTCATTTAATTGGAAGTCTGGACACCTTACGCTTGATCAGACAGTCGTTCCAGTTGCTTCATCGGATCCCTTCTTGCGAGTGACATTtacattttcttccattgaGGAAGCTGGCTCTTTTTCTACATTGAACTTAAGAATACCAACTTGGACGCATTCAGATGGTGCCAAGGGGATACTAAATACTGAAACTTTAGCTCTGCCAGCTCCAGGCAATTTTTTGTCAATCGCTCGAAAGTGGAGTGCTGGTGACAAGCTAACCCTTGAGTTACCAATTACGCTTAGATTAGAGGCTATAAAAGATGACAGGTCTGAATATGCTTCTGTTCTCGCAATTCTTTATGGTCCATATCTTCTTGCCGGTCATACCACTGGTGATTGGGACATCAAAGCTGGGTCGAATGGCTCTATTACTGATTGGGTCACTCCAATCCCTGCCAGTTACAATACCCAgctagtttcttttttccaagaTTTTTCGGACTCAACTTTTGTTATAACAAACTCAAAGCAATCATTTACAATGGAAAAATTACCTGAATCTGGCACTGAATATGCTCTTCATGCAACCTTCAGAGTTATTTTGACAGGTGCCACTGCTACATCAGTGATGCTGGAACCTTTTGATCTTCCGGGGTTGTTGGTGATGCACCAAGGACCAGAACAGCCTCTCATAGTGGGTTCTTCGAGTGGTGGAGCCTCTGcggtttttcttttagtatcAGGATTGGATGGAAGAAATGAAACAATATCCTTAGAATCCAAAAGCAACAAGGGTTGCTTTGTGATTAGTGGTCTAAGCAGTGGTGCAGGAGTGAAGCTCAGTTGCAAATCAGAGTTATCTGCTTCTGATGATACTTTCAATCAAGCAGCAAGCTTTACAGGGATGGAGGGATTAAGTTATTATAATCCGGTCAGTTTTGTGGCTAAAGGGGAAAagaggaattttcttttggagccATTGTTCACCTTTAGAGATGAACCTTATACGGTTTATTTCAACATTCAACCTTG 2618 0.4121 MIETNCATYKSVPPPTIILLMRMKALLLAFVVLVICLCDCALSRKECTNTVTASHSFRYELLTSTNETWKAQVMSHYHLTPTDESTWGNLLPRKFLKEEQQHDWAFLYRTIKNMGVFKAPQGFLKEVSLHDVRLHNDSIHGRAQQTNLEYLLMLDVDRLVWSFRKTAGLPTPGTPYGGWEAPQSELRGHFVGHYLSASAQMWASTHNGSLKEKMSALVTALSACQEKIGTGYLSAFPSEFFDRFEAVQPVWAPYYTIHKILAGLLDQHMLAGNPQALKMVTWMVDYFYNRVQNVITKYTINRHYQSLNEETGGMNDVLYRLYSLTGDAKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVIGSQMRYEVTGDPFYKEIGTFFMDLVNSSHSYATGGTSVSEFWSNPKRIADNLQTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGRGVSKAKSYHSWGTKFDDFWCCYGTGIESFSKLGDSIYFEEEGKDPSLYIIQYISSSFNWKSGHLTLDQTVVPVASSDPFLRVTFTFSSIEEAGSFSTLNLRIPTWTHSDGAKGILNTETLALPAPGNFLSIARKWSAGDKLTLELPITLRLEAIKDDRSEYASVLAILYGPYLLAGHTTGDWDIKAGSNGSITDWVTPIPASYNTQLVSFFQDFSDSTFVITNSKQSFTMEKLPESGTEYALHATFRVILTGATATSVMLEPFDLPGLLVMHQGPEQPLIVGSSSGGASAVFLLVSGLDGRNETISLESKSNKGCFVISGLSSGAGVKLSCKSELSASDDTFNQAASFTGMEGLSYYNPVSFVAKGEKRNFLLEPLFTFRDEPYTVYFNIQP 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02566 872 SUPERFAMILY Six-hairpin glycosidases 188 501 IPR008928 GO:0005975
Bva07g02566 872 PANTHER - 30 871 - -
Bva07g02566 872 Gene3D - 729 860 - -
Bva07g02566 872 Pfam Beta-L-arabinofuranosidase, GH127 132 655 IPR012878 -
Bva07g02566 872 PANTHER PROLINE-TRNA LIGASE (DUF1680) 30 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02566 Bva-Chr7 20348524 20354883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02566 K09955 - gmx:100783150 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02566 07 20348524 20354883 Bva09g00069 09 323096 330227 BWGD
Bva07g02566 07 20348524 20354883 Bva07g02566 07 20348524 20354883 ECH