Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02541 atgtcGGGCGGATTCTTTCGAGGTACATCTGCTGACCAAGACACCCGATTCTCTAACAAGCAGGCTAAGCTGCTGAAATCTCAGAAGTTCGCGCCTGAGCTGGACCATCTGgTGGACATGACAAAGGTGAATATGGAAGTAATAAAGCCATGGATCACGAGGAGGGTGACTGAGCTTCTTGGATTCGAAGATGAAGTGCTTATTAACTTCATACATAGTCTTTTGGATGTCAAGGCGGTGAATGGGAAGGAAGTCCAAATACAAATTACTGGATTTATGGAAAAGAACACTGGAAAGTTCATGAAAGAGCTTTGGACTCTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCTAAAGAAGAAGAGCTCAGGAAGAAGAAGATTGAAAATGATAGGATAACTAGTGAAattcagaagaaaaaggataagGAAAGTAGAGAGATCATGCAACagaggatgaagaaaatgGACGGTGAATTTGATGCCAAGGATCCTGATACTGCTTCAGACCGAGCCTTGAAGTCCAGGGATTCAGGGGATTATATTCAGGAGGGGAAAGACACTGACAAGCGGAATGGTGTGAGAGCAAGGAACAGGGTCTCTAAGTCTCCGCATTCACCTGCAGTTTCTACTTCTCCACACCAGTCAATGAGcaaatcattttcaaactCTCAAAGTTATTCAGGTGATAGACACAGACCAAGAAGTATATCCAGGTCACCTGAAGCACGAGGACGCTCTCATTCTTCTGAAAGGATTCGTTGCCCTTCTCGGAGGCGATCCATTTCTCCTCCTCGCAGGCGTTCACCACGGCAATCTCCTTCTCCTCGTAGGAGACCATCTTATTTGAGGCGGAGATCCAGGTCTCGGTCACATTATAAATCACCCTCTCCTATACGGCGCAGAGTACATTCTCCATTCCGTCACAGGTCACCTTCTCCATTGCGTCGACGCAGGTCACCTTCTTCGTTGCGTCGACGCAGGTCACCTTCTCCGTTGCGTCGACGCAGGTCACCTTCTCTGTTGCATCGACGCAAGTCACCTTCTCCGTTGCGTCGACGCAGGTCACCTTCTCCGTTGCGTCGACGCAGGTCACCTTCTCCGTTGCATCGACGCAGGTCACCTTCTCCCATCAGAAGACATAGATCACCTTCTCCATTGCGCCGACGTAGATCCCCATCACCCATAAGACAAAGCTCACCATCACTTGCACGAAGGAGATCTCCCATCACGAGGCGTAGATCGCCCTCTCTTGGCCGCCATCGATCACCTGTACCTGCTAGCCAAGTGTCACCATTACCTCCACAACATAGATCATCTTCTCCCTTGGATTCTCCTTCTCCTGCAAGGCGAAAGTATAGAATTAGAACTCCACGACATACGTCTCCATCTCCTTTGCCGCATAGGGCACCTATAAATAAAAGGCTGTCAAGTCTTTCTCCTCACAGGTCTTCCACTCCAAGTGAAAGGAGCTCACAATCCCCAATACAGCATGCATATCCATCACAGGGTGGGAGAAAAATGTCAAGACACGAAAGAAGTCCTGTGCTCTCTTCTTGGGGAAAAGTCAGAATGCAAGAGAGATCATCACTTGAGGCACATCAACCCTTTAGTCCTTTGAGGATTTTGCAGAGGGACAAGCATCGCACCTCTTCACGCCACAAATCAGAGGATTCGTTTTCTACACCTGAGAAGTCTCCAATTGTGTcagcagctccacgggcaagGAATAGTTCTAGTAGTGAAGACAGAAGGTCATTTAGTCCATATGGAAGCCCTGGGAGGCAAAGAGGGGTGAAGGTGATCCATGAAAAGGATTTGAGTTCTATGCAGAAACCTATACATGACAGCTCAGGAACAAGTGACGGAGCAGAAGAAATGTATAATTCTAGCTTTGGCAGAGAGAACAGGGATCATAAATTGAAGTCATCacaaaatgaatcaaaatattcatctcCTATTAGTAAACGGAATGATTTACCTGCAAAGTATCATAGAAAGGATGAACTCTCTCCCAAAAGGGCAGCTGGTCATCTGTCTTCTGAAAGGCAAGGCCGTTGTGATAAAATTGGTTTAAGAAAGAAGGGTCGGGAGGCGAAAAGTGAAAAATCTCCTGGAAGGGGGATTCATCCTGAAACTCTTGCTCAACAGAAGTCACCAATATATAGTGAGAGGCCTCGTGAACCATACGCTGTAGATAGTAAAAAATCTGATGAGGATAACCGAACCTATTTAAATCAGGTCAAGGATGTCAAGGATGATGATCGTCAAGGCAAGTTAGAGGTTGCTCAAGATTCAGTTAGAAAATTCGATCATGTCAATCCAAGTGTTTCAAATGATTCTGGTTCTGAGAAAAGTGATAAGCATAGAAGGGAAGATAAGGATAGGAGAAAGTATAAAAGATCTGACAGAAAGGTAGTTTCTTCAGATGAGAATTACAGTTATGATTCTGAATTGGAGAAGAGGAAAGAGTctaaaaagaggaaaaaggagGAGAGAAAACTGAGGAAGGAGGAGAAGCGTAAAAGGCGTGAAGAGAGGCGACGCAAAAAGGAAGAACGCCGTGCTGAGAAGCTGAAAAGGAAGGGTAAAGCAGATGACAATGAGGCTGAAAGGTTGGGTTCGCAAGGaagtgatgatgaagagaTTGAATTACGAAATAAGGCTCTTGAATCATTGAATGCAAAGAAGAGAATGAATACTAAATA 2729 0.4346 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDVKAVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELRKKKIENDRITSEIQKKKDKESREIMQQRMKKMDGEFDAKDPDTASDRALKSRDSGDYIQEGKDTDKRNGVRARNRVSKSPHSPAVSTSPHQSMSKSFSNSQSYSGDRHRPRSISRSPEARGRSHSSERIRCPSRRRSISPPRRRSPRQSPSPRRRPSYLRRRSRSRSHYKSPSPIRRRVHSPFRHRSPSPLRRRRSPSSLRRRRSPSPLRRRRSPSLLHRRKSPSPLRRRRSPSPLRRRRSPSPLHRRRSPSPIRRHRSPSPLRRRRSPSPIRQSSPSLARRRSPITRRRSPSLGRHRSPVPASQVSPLPPQHRSSSPLDSPSPARRKYRIRTPRHTSPSPLPHRAPINKRLSSLSPHRSSTPSERSSQSPIQHAYPSQGGRKMSRHERSPVLSSWGKVRMQERSSLEAHQPFSPLRILQRDKHRTSSRHKSEDSFSTPEKSPIVSAAPRARNSSSSEDRRSFSPYGSPGRQRGVKVIHEKDLSSMQKPIHDSSGTSDGAEEIFGRENRDHKLKSSQNESKYSSPISKRNDLPAKYHRKDELSPKRAAGHLSSERQGRCDKIGLRKKGREAKSEKSPGRGIHPETLAQQKSPIYSERPREPYAVDSKKSDEDNRTYLNQVKDVKDDDRQGKLEVAQDSVRKFDHVNPSVSNDSGSEKSDKHRREDKDRRKYKRSDRKVVSSDENYSYDSELEKRKESKKRKKEERKLRKEEKRKRREERRRKKEERRAEKLKRKGKADDNEAERLGSQGSDDEEIELRNKALESLNAKKRMNTK 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02541 905 MobiDBLite consensus disorder prediction 731 771 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 633 648 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 399 413 - -
Bva07g02541 905 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 407 900 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 439 453 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 785 829 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 210 238 - -
Bva07g02541 905 Coils Coil 123 150 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 239 265 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 141 203 - -
Bva07g02541 905 Coils Coil 824 872 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 853 898 - -
Bva07g02541 905 Pfam PWI domain 46 115 IPR002483 GO:0006397
Bva07g02541 905 MobiDBLite consensus disorder prediction 662 710 - -
Bva07g02541 905 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 407 900 - -
Bva07g02541 905 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 415 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 830 852 - -
Bva07g02541 905 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 415 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 484 507 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 266 395 - -
Bva07g02541 905 SMART pwi_2 40 114 IPR002483 GO:0006397
Bva07g02541 905 Gene3D PWI domain 33 125 - -
Bva07g02541 905 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Bva07g02541 905 MobiDBLite consensus disorder prediction 548 568 - -
Bva07g02541 905 MobiDBLite consensus disorder prediction 141 905 - -
Bva07g02541 905 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Bva07g02541 905 MobiDBLite consensus disorder prediction 569 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02541 Bva-Chr7 20235690 20241670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02541 K13171 - gmx:100810238 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02541 07 20235690 20241670 Bva07g02541 07 20235690 20241670 ECH