Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02527 ATGCTCCCCTCTACCAATCGAGCTACATCAACGATAAGATCCATTACCActccaaaatatcaaaagcaaGCTTCAGTATTTACCACTGCTGTTATCTCCTCCTATTACCGCACAATCTTTGTTCCATTTTATTGGAAAGATTTTCGAAGGATGATCTCTTCAAGGATTGGACGCTCGCTATCGCGTGCCTCTCGCACCGGAAATTTGTTGTATGGGAATGGGAGATGGGCAATCCTGAATGAATCTCTTCCGGGAGCGCCGCGAACGAATGCGTATTCTGGGGGGGTGGAAGCGGGGTTAGGGCTTTTGAGAGGTTATATAGCTGCAGTTGGAGCTCGTCAAGGCTTACTTGCCAATTTGTCTGATATTAGATATATTGCCACAAATCCTAGACTTCTCCGGATGTTTTCCAGTGAAGccccaaagaaaaagaATTATGAGAACTTCTATCCtaaggaaaagaaggaaattccAAAACAAAACGAGCAGAAGTCCGAGTCCAAAGATGATTCAAACGCGGATGATCACGGGAATTTCCAAGAAACTATCATGAAGCAATTTCAAAACCTAATCACCCCTTTATTGATGATAGGGctatttctttcatctttttcttttggacctCGTGAACAGCAACAGATTAGTTTCCAAGAgttcaaaaataaacttttggaACCAGGATTAGTGGACCATATTGTTGTTTCAAATAAATCTGTTGCCAAAATATATGTAAGGAATTCTCCCCATAACCAAACAGATGGTGATGTCGTCCATGGCCCAGTTAATGGTACCCATGCAAGGGGAAATGGCGGGCAATATAAATACTATTTCACCATTGGAAGTGTTGAGTCTTTTGAGGAGAAATTAGAAGAAGCCCAGCAAGCACTCGGAATTGACCCTCATGATTATGTTCCTGTTACATATGTTTCTGAAATGGTTTGGTACCAGGAATTAATGAGATTTGCTCCAACAATGCTGCTTTTGGGAACCCTCTGGTATATGGGAAGGAGGATGCAAGGTGGACTCGGTGTTGGAGGTGGTGGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAGGCCCATGTTACTAAAGTAGATAAAAATGCCAAAAACAAGGTCTATTTTAAAGATGTTGCTGGTTGTGATGAGGCAAAGCAAGAAATCATGGAGTTTGTCCACTTCCTCAAGAACCcaaagaaatatgaagaaCTTGGTGCAAAAATACCTAAAGGTGCTCTTCTGGTAGGGCCTCCGGGCACTGGAAAAACCCTTCTAGCAAAAGCAACTGCTGGAGAATCTGGTGTACCGTTTCTGTCTATATCTGGTTCTGATTTCATGGAGATGTTTGTCGGTGTTGGACCATCCAGGGTTAGAAACTTGTTTCAAGAAGCAAGGCAGTGTGCTCCCAGTATTATATTTATCGATGAGATTGATGCAATTGGTAGAGCTAGGGGTCGTGGAGGTCTTTCAGGTGCTAATGATGAGCGTGAGAGTACTTTAAATCAATTGCTGGTAGAGATGGATGGTTTCGGAACCACCTCTGGCGTTGTTGTTCTTGCTGGCACTAATAGGCCTGATATTTTGGACAAAGCTCTACTTAGGCCTGGGCGATTTGACCGCCAGGTCAGTATTGATAAACCTGATATCAAAGGTCGGGAACAGATATTTCAGATCTacttgaaaaagataaaacttgACCATGAGCcttcatatttttctcaaaggCTCGCAGCCCTTACTCCTGGATTTGCTGGAGCAGACATTGCCAATGTTTGCAATGAAGCTGCTCTTATTGCTGCTAGAGGTGAGGGAACACAAGTCAAAATGGAACATTTTGAGGCTGCTATTGATAGGGTTATTGGTGGTttggagaagaagaacaagGTTATAAGCAAGCTGGAAAGGCGTACTGTTGCTTACCATGAATCTGGCCATGCCGTTGTTGGCTGGTTCTTAGAATATGCCGAACCTTTGTTGAAGGTAACTATAGTTCCTCGTGGCACAGCTGCTCTTGGGTTTGCCCAGTATGTTCCCAACGAGAACCTTCTCATGACAAAGGAGCAGCTTTTTGATATGACTTGCATGACCCTTGGTGGTCGGGCTGCTGAAGAGGTACTACTGGGGAAAATTTCTACAGGAGCACAAAATGACTTGGAAAAAGTGACTAAGATGACCTATGCCCAAGTAGCGGTGTATGGTTTTAGCGACAAGGTTGGTCTCCTATCTTTCCCTCAAAGGGAGGACTCGTTTGAGATGACAAAACCATACAGCAGCAAGACTGGTGCAATAATTGACAGCGAAGTGCGAGATTGGGTTAGGAAGGCATACGAACGCACCGTAGAGCTCGTTGAGGAAAAGAAGGAGCAAGTGGCTAAAATTGCAGAGTTGCTGCTGGAGAAAGAAGTGCTTCACCAGGAGGACTTGGTCAGAGTTTTGGGCGAGCGGCCATTCCAATCAAGCGAAGTGACGAATTATGATAGATTTAAGCAAGGTTTCAgagaggaggaagaaaaaattgtagaaagcCCTGCGGATAGGCCTGAGCCTGAGGAGGTTGTTCCCACATA 2570 0.4128 MLPSTNRATSTIRSITTPKYQKQASVFTTAVISSYYRTIFVPFYWKDFRRMISSRIGRSLSRASRTGNLLYGNGRWAILNESLPGAPRTNAYSGGVEAGLGLLRGYIAAVGARQGLLANLSDIRYIATNPRLLRMFSSEAPKKKNYENFYPKEKKEIPKQNEQKSESKDDSNADDHGNFQETIMKQFQNLITPLLMIGLFLSSFSFGPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPHNQTDGDVVHGPVNGTHARGNGGQYKYYFTIGSVESFEEKLEEAQQALGIDPHDYVPVTYVSEMVWYQELMRFAPTMLLLGTLWYMGRRMQGGLGVGGGGGKGARGIFNIGKAHVTKVDKNAKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGLSGANDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQVSIDKPDIKGREQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGEGTQVKMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVVGWFLEYAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDSFEMTKPYSSKTGAIIDSEVRDWVRKAYERTVELVEEKKEQVAKIAELLLEKEVLHQEDLVRVLGERPFQSSEVTNYDRFKQGFREEEEKIVESPADRPEPEEVVPT 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02527 856 PANTHER ATP-DEPENDENT PROTEASE 83 843 - -
Bva07g02527 856 MobiDBLite consensus disorder prediction 834 856 - -
Bva07g02527 856 Pfam Peptidase family M41 630 811 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva07g02527 856 MobiDBLite consensus disorder prediction 147 177 - -
Bva07g02527 856 SUPERFAMILY FtsH protease domain-like 630 819 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva07g02527 856 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 314 813 IPR005936 GO:0004176|GO:0004222|GO:0016020
Bva07g02527 856 SMART AAA_5 409 549 IPR003593 -
Bva07g02527 856 Pfam AAA+ lid domain 576 615 IPR041569 -
Bva07g02527 856 Pfam FtsH Extracellular 192 301 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Bva07g02527 856 ProSitePatterns AAA-protein family signature. 517 535 IPR003960 GO:0005524|GO:0016887
Bva07g02527 856 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 10, MITOCHONDRIAL-LIKE 83 843 - -
Bva07g02527 856 Gene3D - 198 313 - -
Bva07g02527 856 MobiDBLite consensus disorder prediction 147 176 - -
Bva07g02527 856 CDD AAA 410 547 - -
Bva07g02527 856 Pfam ATPase family associated with various cellular activities (AAA) 414 545 IPR003959 GO:0005524|GO:0016887
Bva07g02527 856 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 37 847 IPR005936 GO:0004176|GO:0004222|GO:0016020
Bva07g02527 856 Gene3D Peptidase M41 630 831 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva07g02527 856 Gene3D - 357 546 IPR027417 -
Bva07g02527 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 620 IPR027417 -
Bva07g02527 856 Gene3D - 548 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02527 Bva-Chr7 20165552 20172823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02527 54 856 Miscellaneous Gene Families AT2G29080 76.753 0.0 1194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02527 K08956 - qsu:111991990 1327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02527 07 20165552 20172823 Bva07g02527 07 20165552 20172823 ECH