Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02520 ATGGATACTCCTAACAAGAATGAAAGTAAGGGCTTTTTCGCGGCAATGACTTCTGGCTTGTCCATGTTCAGCAACGCTATGCACCGATCTGTCAACGGATTGTTAGGATATGAAGGGGTAGAAGTAATAAATCCAGAGGGAGGTAAAGATGATGCTGAGGAGGAAGCTCAAAGAGGAAGATGGAAACAGGAGGAAAGAGACAGTTATTGGAAGATGATGCACAAATATATAGGCTCTGATGTAACATCAATGGTGACGCTACCTGTTCTTATTTTTGAGCCAATGACTATGCTTCAGAAGATGGCAGAGTTGATGGAGTACTCCTACTTATTAGATCGGGCTGATGAATGCAAGGATCCATACATGCGGTTGGTGTATGCCTCATCATGGGCTATATCTGTGTACTTTGCTTACCAACGAACTTGGAAGCCTTTTAATCCTATTCTAGGAGAGACTTATGAAATGGTTAATCATGGTGGAATTACATTTCTTGCAGAACAGgTGAGCCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAACGAGCATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAACTCTCTTGACGTTTACCCTGTTGGAAGAACACGTGTCACCCTTAAGAGGGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAATCTGATATTTGGCCGGACTTGGGTAGATTCACCTGGGGAAATGATTATGACAAATTTGACAACTGGAGACAAAGCTGTCCTATACTTCCAACCATGTGGATGGTTTGGGGCTGGTCGATATGAAGTGGATGGATATGTTTATAACGCTACTGAGGAGCCCAAAATATTAATGACTGGAAAGTGGAATGAGTCAATGAGTTATCAACCATGTGATTTGGAAGGAGAGCCTCTTCCAAACACAGAACTGAAAGAGGTCTGGCATGTTGCTGATGTTCCAGCGGatgataaatttgattataCACATTTTGCACATAAAATAAACAGCTTTGACACCGCCCCTAGAAAGTTGTTGGCATCAGATTCTCGTCTACGCCCAGATAGATATGCACTTAAGATGGGTGATCTATCCAAAGCTGGCGCAGAAAAGAGCAgTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAGGCCCAAGGGCATGAGTTCACACCTAGATGGTTTGATCTAACTGAAGATGTCACATCCACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATACAATGAGCATCGGGCTTCTGTTGATAGCTCTGGCGACATTGCCGGTGTTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGCAATTCGTCCACAGAATG 1370 0.427 MDTPNKNESKGFFAAMTSGLSMFSNAMHRSVNGLLGYEGVEVINPEGGKDDAEEEAQRGRWKQEERDSYWKMMHKYIGSDVTSMVTLPVLIFEPMTMLQKMAELMEYSYLLDRADECKDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMVNHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSLDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYVYNATEEPKILMTGKWNESMSYQPCDLEGEPLPNTELKEVWHVADVPADDKFDYTHFAHKINSFDTAPRKLLASDSRLRPDRYALKMGDLSKAGAEKSSLEERQRAEKRTREAQGHEFTPRWFDLTEDVTSTPWGDLEIYQYNGKYNEHRASVDSSGDIAGVDVKSIEFNPWQYGNSSTE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02520 456 SUPERFAMILY Oxysterol-binding protein-like 63 433 IPR037239 -
Bva07g02520 456 MobiDBLite consensus disorder prediction 370 391 - -
Bva07g02520 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Bva07g02520 456 Gene3D - 358 444 - -
Bva07g02520 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Bva07g02520 456 MobiDBLite consensus disorder prediction 371 391 - -
Bva07g02520 456 Gene3D - 150 324 - -
Bva07g02520 456 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Bva07g02520 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02520 Bva-Chr7 20131079 20135795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02520 - - tcc:18590671 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00126 09 582017 587453 Bva07g02520 07 20131079 20135795 BWGD
Bva07g02520 07 20131079 20135795 Bva07g02520 07 20131079 20135795 ECH