Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02468 atGGAGTTCCTCACTTTTCTGTTCCTTGTTCCAGTTTTGTACTTCTGTCTCCTGTTTTGGAAACTCTTTGACCAGAGAAGGGACCAGGAGTGCTACTTATTGGACTACCAATGCTATAAGCCAAGCGATGATAGAAAGCTTGATACAGTGTTTTGTGGTGAGATCATCAGAAGAACCGAGAACTTGGGTCTCAATGAGTATAAGTTCCTCCTCAAAGCCATTGTCAGCTCCGGCATTGGGGAGCAAACTTATGCCCCAAGAAATGTATTCTCCGGTCGTGAAGCAAACCCCACATTGACGGATGCAATCTTAGAGATGGAGGAGTTCTTCTATGATAGCATTGGAAAGCTCTTGACCAGATCAGGCATTTCCCCCTCAGAGATTGATGTTCTCGTCGTTAATGTCTCCATGTTGTCTGCTGTTCCTTCTCTGTCTTCTCGGATCATTAACCATTACAGAATGAGGGAGGACATCAAGGCTTACAATCTCACAGGCATGGGTTGCAGTGCAAGCCTCCTTTCTTTGGACATTATTAAGAACATCTTTAAGACCCAAAAGAACAAGTATGCTCTTTTGGTCACTTCAGAGTCCTTGAGTCCAAATTGGTATACAGGTAATGACAGATCAATGATTCTTGCCAACTGTTTGTTCCGCTCTGGTGGGTGTGCCATTCTTTTGACAAACAAAAGGTCCTTAAAGAACAAAGCAATGCTGAAATTGAAGTGCTTGGTGAGGACCCATCATGGGGCTAGAGAAGAAGCCTACAATTGTTGCATCCAAAAGGAAGATGAGCAAGGAAGGATGGGATTTCACCTTGGGAAAACTCTCCCCAAGGCAGCTACAAGAGCTTTTGTTGACAATTTAAGGGTAATTTCACCCAAGATTTTGCCAATAAGGGAGTTGCTCAGGTTCATGGTTGTGTCCCTCTTTAAAAAGCTCAGGAAAAGCAGTCCCCCTAAGTCTGCAGTGGGTGTCGCAAAATCTCCACTAAACTTCAAGACAGGGGTTGATCATTTTTGTCTCCATACAGGAGGAAAGGCTGTGATTGATGGCATAGGAATGAGCTTGGATCTTTCTGAGTATGACCTTGAGCCAGCAAGGATGACACTACACCGTTTTGGGAACACATCTGCAAGTAGCCTCTGGTATGTGTTAGGGTATATGGAGGCCAAGAAGAGGCTCAAGAAGGGCGATAGTGTCTTTATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTGATGAAGGATCTGGGAGATGCTAACGTGTGGGAAGATTGCATTCATGACTATCCACCAGATTGCTTGTCCAACCCTTTCATGGAGAAGTTTGGTTGGATTAAAGATGAGGACCCAAGTACCTTCAAACTTCCAGATCATATCCAATA 1400 0.4421 MEFLTFLFLVPVLYFCLLFWKLFDQRRDQECYLLDYQCYKPSDDRKLDTVFCGEIIRRTENLGLNEYKFLLKAIVSSGIGEQTYAPRNVFSGREANPTLTDAILEMEEFFYDSIGKLLTRSGISPSEIDVLVVNVSMLSAVPSLSSRIINHYRMREDIKAYNLTGMGCSASLLSLDIIKNIFKTQKNKYALLVTSESLSPNWYTGNDRSMILANCLFRSGGCAILLTNKRSLKNKAMLKLKCLVRTHHGAREEAYNCCIQKEDEQGRMGFHLGKTLPKAATRAFVDNLRVISPKILPIRELLRFMVVSLFKKLRKSSPPKSAVGVAKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDSVFMISFGAGFKCNSCLWEVMKDLGDANVWEDCIHDYPPDCLSNPFMEKFGWIKDEDPSTFKLPDHIQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02468 466 PANTHER 3-KETOACYL-COA SYNTHASE 1 457 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva07g02468 466 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Bva07g02468 466 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva07g02468 466 SUPERFAMILY Thiolase-like 243 419 IPR016039 GO:0016746
Bva07g02468 466 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 450 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva07g02468 466 Gene3D - 69 418 IPR016039 GO:0016746
Bva07g02468 466 CDD CHS_like 17 416 - -
Bva07g02468 466 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 336 417 IPR013747 -
Bva07g02468 466 PANTHER 3-KETOACYL-COA SYNTHASE 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02468 Bva-Chr7 19875614 19877678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02468 19 463 Acyl Lipid Metabolism Gene Families AT2G28630 72.088 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02468 K15397 - gmx:100809149 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00174 09 828508 830361 Bva07g02468 07 19875614 19877678 BWGD
Bva07g02468 07 19875614 19877678 Bva07g02468 07 19875614 19877678 ECH
Bva09g00174 09 828508 830361 Bva07g02468 07 19875614 19877678 ECH