Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02439 ATGAGAACTAGCAATCATTTGATTGGTGTCCTAAACTTCTTGACGTTCTTGCTGTCAGTTCCAATACTGGGAGGTGGGATATGGCTGAGCAGCAGAGCAAACAACACAGATTGCCTCAAGTTTCTTCAGTGGCCGTTGATCATAATCGGAGCCTGTATCATGATCATCTCTTTAGCTGGTATTGCCGGCGCATGTTACCGCAACACATTCCTAATGTGGCTTTATCTCTTCGTCATGTTCTTCGTCATCGCCGCACTCATCGGCTTCATCATCTTCGCCTACGTGGTCACAGATAAAGGGTCGGGTCGAACGGTAATGAACCGGGCTTATTTGGACTATTACCTGCAGGACTATTCTGGTTGGTTGGAGGAGCGTGTAGCCAGCGATAGTTACTGGGGAAAGATCGCTTCCTGTATAAGCCAGGACTCTAAGGTCTGTGCCAAGATGGGCAGAAATGTTGGTGGAGTCCCCGAAACTGCTGAGATATTCTACCTTAGAAGACTTAGCCCAATTCAgTCTGGTTGCTGCAAGCCCCCAACAGAGTGTGGGTACGTGTATCAGAACGAAACAGTGTGGAACCCAGGAGCGGGGCTAGTTGGAGCCAACCCAGACTGCACGAGGTGGAGCAATGATCAAGAACAGCTTTGTTATGGCTGCGATTCATGTAAGGCCGGTGTGCTAGCTAGCCTCAAAAAGAGCTGGAGGAAGGTGTCGGTCATCAACATTGTTGTCATGATCATTCTGGTTATTGTCTACATAATTGCTTATGCAGCATTTAGAAACAACCGCAAGATGGACAATGATGAACCCTCTGGCGAGGCAAGGATGACAAAGGCACACCCTACAAGATTTGAGTTTTA 860 0.4779 MRTSNHLIGVLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGACIMIISLAGIAGACYRNTFLMWLYLFVMFFVIAALIGFIIFAYVVTDKGSGRTVMNRAYLDYYLQDYSGWLEERVASDSYWGKIASCISQDSKVCAKMGRNVGGVPETAEIFYLRRLSPIQSGCCKPPTECGYVYQNETVWNPGAGLVGANPDCTRWSNDQEQLCYGCDSCKAGVLASLKKSWRKVSVINIVVMIILVIVYIIAYAAFRNNRKMDNDEPSGEARMTKAHPTRFEF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02439 286 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
Bva07g02439 286 PRINTS Transmembrane four family signature 6 29 - -
Bva07g02439 286 PRINTS Transmembrane four family signature 39 65 - -
Bva07g02439 286 PRINTS Transmembrane four family signature 66 94 - -
Bva07g02439 286 PANTHER TETRASPANIN-3-LIKE 1 280 - -
Bva07g02439 286 PANTHER TETRASPANIN-8-RELATED 1 280 IPR044991 GO:0009734|GO:0016021
Bva07g02439 286 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Bva07g02439 286 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02439 Bva-Chr7 19690232 19692745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02439 1 286 Miscellaneous Gene Families AT5G60220 72.727 9.63e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02439 - - gmx:100798336 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00207 09 1049861 1052562 Bva07g02439 07 19690232 19692745 BWGD
Bva07g02439 07 19690232 19692745 Bva07g02439 07 19690232 19692745 ECH