Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02428 ATGCACAGGATCACCTCGGCGAGGTCTATTTGTTCTGCGATTTTCAGAAGGAAAACTCACTCTGCTGCTTTCTCCACCTCTTTACTCTTCGATGAAACTCAGATACAGTTTAAAGAAAGTGTTGCACAGTTTGCGAGGGAAAACATTGCCCCTTATGCATCAAGAATAGACCACACAAATTCTTTCCCAGGGGAGGTCAACTTATGGAAATGCATGGGAGATTTTAATCTCCATGGGATTACTGCTCCAGAGGAATATGGAGGGCTTGGTCttggttatatatatcattgtaTAGCAATGGAAGAAATAAGCCGCGCTTCAGGGTCTGTTGGGCTTTCTTACGGTGCTCATTCTAACCTGTGTATCAATCAGCTGGTGCGGAATGCTAACACTGCTCAGAAACACAAGTACTTGCCACAGCTTATCTCTGGGGAGCATGTGGGCGCTTTGGCAATGAGTGAGCCCAATGCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGTGGCTACATAATTAATGGCAACAAGATGTGGTGTACCAATGGTCCAGTCGCTCAAACATTAGTTGTTTATGCTAAAACAGACACAACAGCTGGGTCAAAAGGAATCACAGCATTCATCATCGAGAAGGGAATGCCGGGATTCAGTACTGCACAGAAActggacaaacttggtatgCGAGGAAGTGATACATGTGAGCTTGTTTTTGAGAACTGCTTCGTTCCAGAAGAAAATGTTCTTGGACAAGAAGGGAAAGGAGTCTATGTCATGATGTCTGGGTTGGATCTGGAGAGACTTGTGTTGGCAGCTGGTCCCCTTGGTATTATGCAAGCTTGTCTTGATATTGTTCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGCCGTCCTATTGGGGAGTTTCAGTTTATACAGGGGAAAATTGCCGACATGTATACTTCTTTACAGTCATCTAGGTCTTACGTATATTCTGTTGCCCGGGACTGCGACAATGGAAAAATTTACCCAAAGGATTGTGCTGGAGCAATACTTTGTGCAGCCGAAAGAGCAACGCAAGTCGCTTTGCAGGCTATACAATGTTTAGGTGGGAATGGATATGTGAATGAGTATACAACTGGTCGTCTTCTTAGAGATGCCAAACTCTACGAGATTGGAGCAGGAACTAGCGAGATCAGAAGGATGATTATTGGTCGTGAACTCTTCAAAGAACAATG 1226 0.4323 MHRITSARSICSAIFRRKTHSAAFSTSLLFDETQIQFKESVAQFARENIAPYASRIDHTNSFPGEVNLWKCMGDFNLHGITAPEEYGGLGLGYIYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNANTAQKHKYLPQLISGEHVGALAMSEPNAGSDVVSMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDTTAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDIVLPYVRQREQFGRPIGEFQFIQGKIADMYTSLQSSRSYVYSVARDCDNGKIYPKDCAGAILCAAERATQVALQAIQCLGGNGYVNEYTTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02428 408 Pfam Acyl-CoA dehydrogenase, N-terminal domain 32 145 IPR013786 GO:0016627|GO:0050660
Bva07g02428 408 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 363 382 IPR006089 GO:0003995
Bva07g02428 408 Gene3D - 19 146 IPR037069 GO:0016627|GO:0050660
Bva07g02428 408 PANTHER ACYL-COA DEHYDROGENASE 1 408 - -
Bva07g02428 408 Pfam Acyl-CoA dehydrogenase, C-terminal domain 256 404 IPR009075 GO:0016627
Bva07g02428 408 CDD IVD 30 406 IPR034183 GO:0003995
Bva07g02428 408 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 24 267 IPR009100 GO:0016627
Bva07g02428 408 Gene3D - 148 260 IPR046373 GO:0016627
Bva07g02428 408 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 151 163 IPR006089 GO:0003995
Bva07g02428 408 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 254 406 IPR036250 GO:0016627
Bva07g02428 408 Pfam Acyl-CoA dehydrogenase, middle domain 149 244 IPR006091 GO:0016627
Bva07g02428 408 Gene3D - 261 404 - -
Bva07g02428 408 PANTHER 2-METHYLACYL-COA DEHYDROGENASE, MITOCHONDRIAL 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02428 Bva-Chr7 19614773 19621747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02428 1 408 Acyl Lipid Metabolism Gene Families AT3G45300 84.841 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02428 K00253 - jre:109009331 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02428 07 19614773 19621747 Bva07g02428 07 19614773 19621747 ECH