Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02367 ATGGCCTCAGCCAACGCTATCTCCTCGGCCTCCATTCTTCGCTCTCCTAAACAGGCGCAGAGTTTGAGCAAGAGACCAAATGGAAGGATAAATTACAGGCAATCGAGCAATCGGTTTGTGGTCAAGGCTTCTGCGAAAGAGATTGCCTTTGACCAGAATTCTCGAAGAGCCCTTCAGGCTGGTATTGATAAACTCGCTGATGCTGTTGGACTTACACTTGGGCCTCGGGGGAGAAATGTTGTCCTAGATGAGTTTGGAAATCCAAGAGTAGTTAATGATGGAGTGACCATCGCTCGAGCCATTGAACTAGCTGATGCCATGGAAAATGCTGGTGCAGCTCTGATTAGAGAGGTTGCAAGTAAAACCAATGACTCTGCGGGTGATGGGACAACAACAGCATCGGTTCTTGCTCGAGAAATAATTAAGCTGGGTCTTCTCAGTGTGACTTCCGGTGCTAATCCAGTGTCCATTAAAAGAGGAATTGATAAAACTGTACAGGGTCTGATAGAAGAGCTTGAAAAGAAAGCCAGGGCTGTTGAAGGCCGAGATGATATTAAAGCTGTTGCTTCTATTTCTGCTGGAAATGATGAGCTGATTGGAACAATGATCGCCGATGCAATTGACAAGGTTGGACCTGATGGTGTCTTATCCATTGAGtcatcatcttcttttgaGACAACagttgaagttgaagaaggaATGGAGATCGATAGAGGTTATATCTCTCCTCAATTTGTCACAAACCTCGAGAAGTTAATAGTTGAATTTGAGAACGCAAGAGTGTTGATAACTGATCAAAAGATTTCAGCAATAAAAGACATTATTCCTTTGTTAGAGAAAACTACTCAATTGAGAGCTCCTCTGCTTATCATTGCTGAAGATGTCACTGGTGAGGCTTTGGCTACCCTTGTTGTGAATAAATTGCGGGGTATCCTTAATGTTGCTGCCATAAAAGCTCCTGGATTTGGTGAGCGGAGAAAGGCTCTGCTTCAGGACATTGCCATTTTGACAGGTGCTGAGTTCCAAGCCAGTGATCTGGGCCTGAATGTTGAAAACACGTCAATTGAGCAGCTTGGTTTGGCTCGGAAAGTTACCATTACTAAGGATTCCACTACTATTATTGCTGATGCGGCATCGAAGGACGAGTTGCAAGCAAGGATTGCACAGTTAAAGAAGGAGTTAGCGGAGACAGACTCAGTCTATGACTCTGAGAAACTGGCGGAGAGGATTGCTAAATTATCAGGTGGAGTTGCCGTCATTAAAGTTGGTGCTGCCACAGAGACTGAACTCGAGGATCGAAAGCTTCGTATTGAGGATGCCAAGAATGCAACTTTTGCTGCCATTGAGGAAGGAATTGTACCTGGTGGAGGTACTGCATTGGTTCATCTGGCATCTCTTGTTCCAGCTATCAAGGACAAGCTCGAAGATGCAGATGAGCGGCTAGGAGCTGAGATTGTGCAAAAGGCACTGGTAGCACCAGCAGCATTGATTGCTCAAAATGCTGGAATTGAAGGTGAAGTTGttgttgagaaaattaaaaatagtgatTGGGAGGTTGGTTATAATGCTATGACAGACAAATATGAGAATTTGGTGGAGGCTGGAGTTATTGATCCCGCCAAGGTAACAAGGTGTGCTTTGCAGAATGCTGCTTCAGTTGCCGGAATGGTATTGACCACGCAGGCCATCGTGGTAGAAAAAGCTAAGCCCAAGGCTCCCGCGGCTTCTCCCCCACAAGGGCTTACTGTTTA 1751 0.442 MASANAISSASILRSPKQAQSLSKRPNGRINYRQSSNRFVVKASAKEIAFDQNSRRALQAGIDKLADAVGLTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARAVEGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNLEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLNVENTSIEQLGLARKVTITKDSTTIIADAASKDELQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLASLVPAIKDKLEDADERLGAEIVQKALVAPAALIAQNAGIEGEVVVEKIKNSDWEVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKAPAASPPQGLTV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02367 583 Hamap Chaperonin GroEL [groEL]. 44 581 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 SUPERFAMILY GroEL equatorial domain-like 49 564 IPR027413 -
Bva07g02367 583 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 581 - -
Bva07g02367 583 PANTHER BNAA04G16190D PROTEIN 1 581 - -
Bva07g02367 583 SUPERFAMILY GroEL apical domain-like 225 417 IPR027409 -
Bva07g02367 583 Coils Coil 373 400 - -
Bva07g02367 583 PRINTS 60kDa chaperonin signature 309 332 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 PRINTS 60kDa chaperonin signature 124 151 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 PRINTS 60kDa chaperonin signature 69 95 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 PRINTS 60kDa chaperonin signature 439 460 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 PRINTS 60kDa chaperonin signature 391 416 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 ProSitePatterns Chaperonins cpn60 signature. 446 457 IPR018370 GO:0005524|GO:0006457
Bva07g02367 583 Gene3D - 48 565 IPR027413 -
Bva07g02367 583 Pfam TCP-1/cpn60 chaperonin family 65 567 IPR002423 GO:0005524
Bva07g02367 583 Gene3D GroEL 233 414 IPR027409 -
Bva07g02367 583 CDD GroEL 46 566 IPR001844 GO:0042026|GO:0140662
Bva07g02367 583 Gene3D - 178 451 IPR027410 -
Bva07g02367 583 SUPERFAMILY GroEL-intermediate domain like 179 243 IPR027410 -
Bva07g02367 583 TIGRFAM GroEL: chaperonin GroL 45 569 IPR001844 GO:0042026|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02367 Bva-Chr7 19283925 19288184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02367 - - gmx:100775463 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02367 07 19283925 19288184 Bva07g02367 07 19283925 19288184 ECH