LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g02350	ATGGAGAAGGTGATGAATATACTGAAGCCAAAACCAAACCCTCAGCAGCTATTGAGAGATTGGCAGCGAAGGCTTCGCCAAGAGTGTCGCAACATTGAGCGCCAAATCCGAGATATacagagggaagaaaaaagtGTTCAAAAAGCAATAAGAGATGCAGCAAAGAGAAATGACATGGGTTCTGCTAAGGCACTTGCTAAGGAAATTGTAGGATCTAGGAGAACAGTGAACCATCTTTATGAGAACAAGGCACAGTTGAATTCGATATCCATGCACCTTGGAGAGAGTGTTGCAATTGCTCGTACTGTGGGTCATTTATCTAAGAGTGCTGAGGTTATGAAGCTTGTTAATAACCTCATGAAGGCTCCAGAGATGGCTGTCACAATGCAAGAATTCAGCAAAGAAATGACAAAGGCAGGAGTCATTGAGGAGTTAGTAAATGATGCTGTTGACAATGCATTGGATTCTGAGGATATAGAAGATGAGATAGAAGAAGAGGTCGATAAAGTCTTAACTGCAATAGCTGGTGAAACTGCCGCACAGCTTCCAGAAGCCGCCAGGAAAGAAAAGGCGAAGCTACCTGCTCAAACGGTTGGAGCTACAGGGGAGGAAGAGGCTATAGCCGAGGGTGTTGATGACGaggaagaaatggaagaaataagGGCTCGACTTGCTAAAGTAAGCAACCACGTATCTTCAACACCATATCTTCCAAAAATGCAAGCGGAAAAACTCATAAGGAGCCTTAATTTGTTCCCAAAAGATTCAGTTAACACACAAGTCGGAGACTCTTCTCTTGTTCCTGGAAAGATCGTGGAGAAGAAGTTTACGTTTCCTAATCTTGGTGCTTCTGGGCCTTCTGTTGAAGAGCTTGGTCACCATGCAGGTTATTATAGCCTCCCACATACCAAAGCTGCAAGGATGTTCTATTTATTCTTTGAATCTCGGAGCAGTAAGGATGATCCTGTTGTGATATGGTTAACTGGAGGACCAGGTTGCAGCAGTGAACTGGCTATGTTCTATGAGAATGGTCCTTTTCATATTACAGGCAACTTGTCTCTTTCGTGGAATGACTATGGCTGGGACAAGGTATCGAATCTTCTATATGTAGACCAGCCAACTGGGACAGGTTTCAGCTATACTTCTGATGAGAGTGACCTTCGCCATGATGAACAAGGTGTTAGCAATGATTTGTACGACTTTTTACAGGAATTTTTCAAGCAGCACCATCAATTTGCTAAGAATGGCTTCTATATTACTGGAGAATCATATGCTGGACATTACATTCCTGCACTGGCTTCCCGGGTTTATcaaggaaacaaagaaaaacgagaaattcatattaatcTCAAGGGATTTGCTATCGGCAATGGGCTAACCAATCCTTCAATTCAGTACCAAGCATATGCAGACTATGCATTAGACAAATCATTGATTAATAAGGCCGATCATGACAGAATCAACAAATTGATCCCTCGATGTGAACAAGCCATAAAAGCCTGCGgcACGGGAGGTGAAGATGCTTGCTTGTCTGCCTATTCAGCTTGCAATGAAATATTCCAACAGATTTTGTCCACTGCTGGTAACATTAATTACTATGACGTGAGAAAGAAATGTGAGGGATCACTGTGCTATGACTTCTCAAAGATGGAGACATTCTTAAACGAGAAGGCAGTGAGGGGAGCTTTAGGTGTTGGGGACTTGGAATTTGTTTCATGCAGTAGCGAGGTATACGAGGCAATGCTAACTGACTGGATGAAAAATCTGGAAGTGGGTATTCCTGCTCTTCTTGAGGCTGGAATCAAGGCTCTTGTGTATGCGGGGGAAGAAGATCTCATATGCAATTGGCTCGGGAATTCGAGGTGGGTTCATGCCATGGAATGGTCAGGTCAAAAGGAGTTCGTGGCTTCCCGAACTATACCATTTACAGTTGATGGGGCAGAAGCAGGGCAGATGAAAAGTCACGGTCCTCTCACATTCATCAAGGTATACGAGGCCGGCCACATGGTCCCCATGGATCAACCGAAAGCTGCACTCGAGATGCTTAGGAGCTGGTTGCAAGGGAAGCCGACCATGACAAACAGTGGAGATAATACCGGTCGACAATTGAAAGATCATAGCTCCAACCTCGACAGTCACGCGGCAGCTCCTGTGGTTTCTGGAAACTGTGAAGCCATTCAATCTTCGCAGGGTACCAGTTTCAACGAAGCAATTTCCTTGAGATTAATCGAAAGCTTAAGCCTTCGAAGAGCACAGAGCATGCGAGTTCAGATCACAATACGACTTTA	2288	0.4305	MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKSVQKAIRDAAKRNDMGSAKALAKEIVGSRRTVNHLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIEELVNDAVDNALDSEDIEDEIEEEVDKVLTAIAGETAAQLPEAARKEKAKLPAQTVGATGEEEAIAEGVDDEEEMEEIRARLAKPLSNLQTQTMASSSNLCKISLSLLLLIYVSSLTAASYPSNHVSSTPYLPKMQAEKLIRSLNLFPKDSVNTQVGDSSLVPGKIVEKKFTFPNLGASGPSVEELGHHAGYYSLPHTKAARMFYLFFESRSSKDDPVVIWLTGGPGCSSELAMFYENGPFHITGNLSLSWNDYGWDKVSNLLYVDQPTGTGFSYTSDESDLRHDEQGVSNDLYDFLQEFFKQHHQFAKNGFYITGESYAGHYIPALASRVYQGNKEKREIHINLKGFAIGNGLTNPSIQYQAYADYALDKSLINKADHDRINKLIPRCEQAIKACGTGGEDACLSAYSACNEIFQQILSTAGNINYYDVRKKCEGSLCYDFSKMETFLNEKAVRGALGVGDLEFVSCSSEVYEAMLTDWMKNLEVGIPALLEAGIKALVYAGEEDLICNWLGNSRWVHAMEWSGQKEFVASRTIPFTVDGAEAGQMKSHGPLTFIKVYEAGHMVPMDQPKAALEMLRSWLQGKPTMTNSGDNVSPK	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva07g02350	739	Coils	Coil	18	56	-	-
	Bva07g02350	739	Gene3D	-	9	185	-	-
	Bva07g02350	739	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	271	727	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	Gene3D	alpha/beta hydrolase	311	737	IPR029058	-
	Bva07g02350	739	ProSitePatterns	Serine carboxypeptidases, serine active site.	456	463	IPR018202	GO:0004185
	Bva07g02350	739	PRINTS	Carboxypeptidase C serine protease (S10) family signature	695	708	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	PRINTS	Carboxypeptidase C serine protease (S10) family signature	394	406	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	PRINTS	Carboxypeptidase C serine protease (S10) family signature	442	467	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	PRINTS	Carboxypeptidase C serine protease (S10) family signature	407	417	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED	271	727	-	-
	Bva07g02350	739	SUPERFAMILY	alpha/beta-Hydrolases	329	727	IPR029058	-
	Bva07g02350	739	MobiDBLite	consensus disorder prediction	194	215	-	-
	Bva07g02350	739	Pfam	Serine carboxypeptidase	328	725	IPR001563	GO:0004185\|GO:0006508
	Bva07g02350	739	Pfam	Snf7	21	186	IPR005024	GO:0007034

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g02350	Bva-Chr7	19179097	19185876	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva07g02350	K16298		-	qsu:112023425	769.615

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva07g02350	07	19179097	19185876	Bva07g02350	07	19179097	19185876	ECH