Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02329 ATGGCTCCAAAGCGTACCCAGAAGTTGGTGGTTCAAACGACAAGGAAAGTTGTACAAGAAAGTGTGCAGGTTTCAGTGCCAGTGGTTGGAAGCAGCAAAAGATCAACCCGTGGAAACAACAAAGAAGAGCATGCGAGGACTATTCCCATTGAAGAAGTGACTCCTCAAGCTGCACGATCACAAGCACAAGCACCAGAGGATGGCCAAAATGACCAAGtccaagaaacaaagaaagaggtgCCCACGAAAACAAAGagccaagaaaagaagagaaaaaggggaAGTAGAGTGGGAGAACACTACCAAAGGTACGTGTACAGGGTATTGAAGCAAGTTCACCCTGATATGGGGATTTCATCCAAGGCCATGACTATTCTCAACAATCTGATGACTGACATGTTTGAAAGGCTAGCCGAGGAGGCTGCCAGGCTCAACAAGTACACAGGCCACATGACATTGTCTTCAAGGGAGATCCAAGGGACAGTGAAGCTGGTTTTGCCTGGCGAGCTTGGCAAGCATGCACTTGCCGAAGGGGCCAAAGCTGTGACTACTTACTTATCTAACCACCGCAGATGCTG 578 0.4464 MAPKRTQKLVVQTTRKVVQESVQVSVPVVGSSKRSTRGNNKEEHARTIPIEEVTPQAARSQAQAPEDGQNDQVQETKKEVPTKTKSQEKKRKRGSRVGEHYQRYVYRVLKQVHPDMGISSKAMTILNNLMTDMFERLAEEAARLNKYTGHMTLSSREIQGTVKLVLPGELGKHALAEGAKAVTTYLSNHRRC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02329 192 Pfam Core histone H2A/H2B/H3/H4 55 164 IPR007125 GO:0003677
Bva07g02329 192 SUPERFAMILY Histone-fold 76 187 IPR009072 GO:0046982
Bva07g02329 192 MobiDBLite consensus disorder prediction 54 70 - -
Bva07g02329 192 MobiDBLite consensus disorder prediction 26 96 - -
Bva07g02329 192 MobiDBLite consensus disorder prediction 71 96 - -
Bva07g02329 192 PRINTS Histone H2B signature 101 119 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 PRINTS Histone H2B signature 120 140 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 PRINTS Histone H2B signature 142 159 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 PRINTS Histone H2B signature 159 172 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 PRINTS Histone H2B signature 172 185 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 PANTHER HISTONE H2B 35 188 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 SMART h2b3 91 187 IPR000558 GO:0000786|GO:0003677|GO:0030527
Bva07g02329 192 Gene3D Histone, subunit A 56 189 IPR009072 GO:0046982
Bva07g02329 192 PANTHER HISTONE H2B.2 35 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02329 Bva-Chr7 19086958 19087536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02329 K11252 - gmx:100786873 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02329 07 19086958 19087536 Bva07g02329 07 19086958 19087536 ECH