Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02324 ATGGCTCCGGTTCCGTCTGAGAACGGTGTAGAAGGAGATGACGAGAgagaagaggaggaagaggGTGAGGAAGACGAGGAGGAGCCGCGACTAAAGTACCAGAGAATGGGAGGCAGCGTACCTTCTCTACTAGCCAGTGATGCGGCGTCGTGTATCGCGGTTGCTGAGCGAATGATCGCACTTGGGACCCATGATGGCACCGTTTATATCCTTGATTTTCTTGGGAATCAGGTGAAAGAATTTTCCGCTCATGCTGCTGTTGTTAACGACCTTAGCTTTGATATAGAAGGTGAATATGTGGGAAGCTGTTCTGACGATGGGTCAGTTGTAATAAACTGCCTTTTCATCGATGAGAAactgaaatttgaatatcatCGCCCAATGAAGGCAATTGCTATGGATCCAGATTATGCAAGAAAAGCATCCAGGAGATTTGTCGCAGGTGGTTTAGCAggtcatttatattttaatacaaaGAAATGGTTGGGCTATCGTAATCAGGTTTTGCACTCTGGAGAGGGTCCAATCCATGCGGTGAAGTGGCGAACAAGTCTTGTTGCTTGGGCAGACGATGCAGGAGTTAAGGTTTATGATACTGCTAATGACCAGCGTATAACATTTATTGAAAGACCACGAGGGAGTCCACGCCCTGAGCTATTGCTTCCTCACCTGGTTTGGCAGGACGACACCCTCTTGGTTATTGGCTGGGGGACATCAGTCAAAATTGCATCAATAAGAACAAACCACAACAAAGCAGCCAATGGTACATATAGGCAAGTCTCCTTGTCTGGTCTGAACCAGGTGGATATTGTGGCATCTTTTCAAACTACGTATTTCATCTCAGGAATTGCACCCTTTGGTGATACTTTGGTTGTTCTAGCTTATATTCCTGgagaagaagatggagaaaaGGAGTTTAGTAGAACTGCTCCTTCACGGCAGGGTAATGCACAAAGACCAGAAGTACGTATAGTAACATGGACCAATTATGAACTTTCAACAGATGCTCTACCAGTGCATGGTTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCTCATGCTCCATTCTCAGGTAGCAGTTATGCTGGTGGTCAGTGGGCTGCTGGCGATGAGCCGCTCTACTACATTGTATCTCCAAAGGATGTAGTTATTGCAAAACCAAgGGATACTGAAGATCATATTGCTTGGCTTCTTCAGCATGGATGGCATGAAAAGGCTTTGGCTGCAGTTGAATCTGATCAGGGGCCAAGTGAACTTCTTGATGAGGTGGGGTCTAGGTACCTTGATCATCTGATCgtggaaagaaaatatgccGAAGCAGCATCTTTGTGTCCCAAGTTGCTGCGAGGATCAGCTTCAGCATGGGAGAGATGGGTTTTCCACTTTGCACACCTTCGTCAACTTCCTGTTTTGGTTCCTTATATGCCTACAGAATGCCCCAGACTGCGTGATACTGTTTATGAGGTTGCTCTTGTTGCACTGGCTACAAATCCATCTTTTCATAAGGATCTCTTGTCTACTGTTAAATCATGGCCATCAGTTATTTATTCTGCATTGCATGTTATTTCAGCCATTGAACCCCAACTTAATACTTCATCCATGACTGATTCACTCAAGGAGGCATTGGCAGAGTTATATGTAATTGATGGGCAATATGAGAAAGCCTTTTCGTTGTATGCTGATCTTTTGAAGCCAGAATTATTTGACTTCATTGATAAGCATAACCTGCATGATGCAGTTCGGAAAAAGGTTGTACAATTAATGATGTTAGATTGCAAGCGTGCAGTTCCCCTATTAATCCAAAAGAGGGAACTAATTGGTCCACCCGAAGTTGTGAAACAACTTTTAAATGCCAGAAATAAGGATGACTGCAGATATTTCTTACATTTATATCTCCATTCATTATTTGAAGTAAATCCACATGCTGCAAAGGACTTTCATGACATGCAGGTGGAACTTTATGCAGACTATGATCCAAAAATGCTGCTACCATTTCTTCGTAGCAGTCAACACTATACCCTTGAGAAGGCGTATGAAATTTGCATCAGAAGAGATCTATTGAGGGATCAAGTCTTCATCCTAGGAAGGATGGGAAACTCAAAACAAGCCCTGGCtatcattattaataaattaggggATATAGAAGAgGCTGTAGAGTTTGTCACCATGCAGCATGACGATGACCTTTGGGAAGAACTGATTAAGCAATGTCTTAACAAACCTGAAATGGTGGGCATACTATTGGAGCACACAGTTGGAAATCTTGATCCCCTCTACATTGTAAATAAAGTTCCCAATGGGTTGGAAATACCTCGGCTCAGGGATCGGCTTGTTAAAATTATCACTGATTACAGGACTGAAACATCACTTAGACATGGGTGCAATGATATCCTTAAGGCGGACTGCGTCAACCTCTTGATTAAGTATTACAAAGAGGCAAGACATGGAATTTATTTAAGCAATGAAGAAGATGAGGTAAGACCTAAAAGGAGTGACGTTCATGCTCCTCAGGTGTTTGAGAGATCCCCAAGTCTGAGAACCGTGGAGGTGAAGTCAAAGACTATAGGAGGGGGAAGATGCTGTATATGTTTTGACCCCTTTTCAATACAGAATGTATCagtcattgttttcttttgctgtCATGCATATCACACAACTTGTCTAATGGATTCCTCCTACACTAGTAGCAGCGACAAAGATGTTGAAGCCACTTCCAAAGAGGCAGAAACATATGATGTTTACAATGGCCATGTGGATGATGATGgggatgatgaagaagaaaccaACTTGGGTGGCCCTCGTATGCGTTGTATATTGTGTACTACTGCTGCAAGTTG 2840 0.4113 MAPVPSENGVEGDDEREEEEEGEEDEEEPRLKYQRMGGSVPSLLASDAASCIAVAERMIALGTHDGTVYILDFLGNQVKEFSAHAAVVNDLSFDIEGEYVGSCSDDGSVVINCLFIDEKLKFEYHRPMKAIAMDPDYARKASRRFVAGGLAGHLYFNTKKWLGYRNQVLHSGEGPIHAVKWRTSLVAWADDAGVKVYDTANDQRITFIERPRGSPRPELLLPHLVWQDDTLLVIGWGTSVKIASIRTNHNKAANGTYRQVSLSGLNQVDIVASFQTTYFISGIAPFGDTLVVLAYIPGEEDGEKEFSRTAPSRQGNAQRPEVRIVTWTNYELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHIAWLLQHGWHEKALAAVESDQGPSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTECPRLRDTVYEVALVALATNPSFHKDLLSTVKSWPSVIYSALHVISAIEPQLNTSSMTDSLKEALAELYVIDGQYEKAFSLYADLLKPELFDFIDKHNLHDAVRKKVVQLMMLDCKRAVPLLIQKRELIGPPEVVKQLLNARNKDDCRYFLHLYLHSLFEVNPHAAKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIRRDLLRDQVFILGRMGNSKQALAIIINKLGDIEEAVEFVTMQHDDDLWEELIKQCLNKPEMVGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEARHGIYLSNEEDEVRPKRSDVHAPQVFERSPSLRTVEVKSKTIGGGRCCICFDPFSIQNVSVIVFFCCHAYHTTCLMDSSYTSSSDKDVEATSKEAETYDVYNGHVDDDGDDEEETNLGGPRMRCILCTTAAS 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02324 946 SMART WD40_4 162 198 IPR001680 GO:0005515
Bva07g02324 946 SMART WD40_4 36 72 IPR001680 GO:0005515
Bva07g02324 946 SMART WD40_4 74 113 IPR001680 GO:0005515
Bva07g02324 946 MobiDBLite consensus disorder prediction 11 27 - -
Bva07g02324 946 MobiDBLite consensus disorder prediction 1 33 - -
Bva07g02324 946 PANTHER VACUOLAR PROTEIN SORTING VPS41 1 945 IPR045111 GO:0006623
Bva07g02324 946 SMART CLH_2 600 747 IPR000547 GO:0006886|GO:0016192
Bva07g02324 946 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG 1 945 - -
Bva07g02324 946 SUPERFAMILY WD40 repeat-like 46 248 IPR036322 GO:0005515
Bva07g02324 946 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 600 747 IPR000547 GO:0006886|GO:0016192
Bva07g02324 946 SMART ring_2 861 941 IPR001841 -
Bva07g02324 946 Gene3D - 45 287 IPR015943 GO:0005515
Bva07g02324 946 PIRSF Vps41 5 902 IPR016902 GO:0034058|GO:0046907
Bva07g02324 946 Pfam Region in Clathrin and VPS 605 743 IPR000547 GO:0006886|GO:0016192
Bva07g02324 946 SUPERFAMILY RING/U-box 854 898 - -
Bva07g02324 946 Gene3D Tetratricopeptide repeat domain 538 806 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02324 Bva-Chr7 19054681 19062454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02324 K20184 - gmx:100804340 1692.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02324 07 19054681 19062454 Bva07g02324 07 19054681 19062454 ECH