Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02311 atggCGTCGTCTACGAAGGTAGATCTGGACGGAAACCCCATAAAACCAATCACCATCTGCATGATCGGCGCCGGAGGGTTCATTGGGTCCCACCTCTGTGAGAAGATTCTATCGGAGACACAGCACAAGGTCCTCGCCTTGGATGTTTACAATGACAAGATCAAGCACCTTTTTGAGCCGGACTCACTCTGGGCAGGCCGCATCCAGTTCCACCGCCTCAACATCAAGAACGACTCTAGGCTTGAGGGTCTCATCAAGATGGCAGATCTGACTATAAATCTGGCTGCTATTTGTACTCCCGCGGATTACAATACCCGCCCTCTTGACACAATTTACAGCAATTTCATTGACGCCCTTCCCGTGGTAAAGTACTGCTCGGAAAATAACAAGCGTCTAATTCATTTCTCCACTTGTGAAGTGTATGGGAAAACGATTGGTAGCTTTCTACCAAAAGATAGCCCTCTTCGTCAGGATCCTGAGTACTATGTTCTTAAAGAAGATGCCTCTCCATGCATATTTGGTCCAATTGAAAAGCAGAGATGGTCTTATGCCTGTGCTAAACAATTGATTGAGAGGCTGATTTACGCTGAGGGTGCTGAAAATGGCATGGAGTTCACTATTGTAAGACCTTTTAACTGGATTGGACCTAGGATGGATTTCATACCTGGCGTTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTAGCTTGCTTTAGTAATAATCTTCTCCGCCGAGAGCCTCTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACTTTTATCTACATTAAGGATGCTATTGAAGCTGTTCTATTGATGATTGAAAACCCTTCCAGGGCCAATggacatatttttaatgtggGTAACCCGAACAATGAAGTTACAGTTAGGCAGCTTGCTGAAATGATGACTAAGATCTACTCAAAAGTTAGTGGAGAACCATCTCTGGAGGTACCTACAATTGACGTGAGCTCCAAAGAGTTCTATGGTGAGGGATACGATGATAGTGACAAGAGAATTCCCGACATGACCATAATCAACAGGCAGCTTGGCTGGAATCCTAAGACCTCGCTTTGGGACCTTCTTGAATCCACCCTGACTTATCAGCATAGGACATATGCAGAAGCCATTAAGAAAGTCACTGCAAAAGCAGTTGCAAGCTA 1163 0.4488 MASSTKVDLDGNPIKPITICMIGAGGFIGSHLCEKILSETQHKVLALDVYNDKIKHLFEPDSLWAGRIQFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPEYYVLKEDASPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGMEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEVTVRQLAEMMTKIYSKVSGEPSLEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVTAKAVAS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02311 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 2 386 - -
Bva07g02311 387 PANTHER UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1-RELATED 2 386 - -
Bva07g02311 387 CDD Arna_like_SDR_e 18 372 IPR045869 GO:0016831
Bva07g02311 387 Pfam NAD dependent epimerase/dehydratase family 19 288 IPR001509 -
Bva07g02311 387 Gene3D - 17 379 - -
Bva07g02311 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 370 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02311 Bva-Chr7 18986523 18989270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02311 17 384 Miscellaneous Gene Families AT1G02000 20.256 6.24e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02311 K12449 - tcc:18590419 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00332 09 1713976 1717291 Bva07g02311 07 18986523 18989270 BWGD
Bva07g02311 07 18986523 18989270 Bva07g02311 07 18986523 18989270 ECH