Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02248 ATGCAGTTTCTCACTGCTCAGAACATTCGTGAACTCTATGACTGTGTTGAACCCGAAGTGGTGTTATGCTTGCTTGTTCACAAGGTTATGTTAGCCTCTCTGAAGGAAGGAGTTCGGGAGGGCAGGGTGCTGCTTCATGATTGGCTAGTGATCCTCGTTGCCCAGTACAATGATGATTATAAACTTGTTCCGTACAGCAGCGGTAGTTCCATAAGTTCTCAGATTGATGTTACATTCTCTCAGTCCCCTCAAATGCAGCCTCTACCGCGCTTAGTTTTTGCTCTCCTTCGAAATCCTCTTCTCCGTTGTCACGAAGGTGTTCACCCAGACTATCGCATCTTCCTGCAATGCCTTTTCAGTGCGCTGGAACCGAGTTCCCTTCACCGAGCCGTGTATCCGATGATGACCTCGTATTCTACTCCGGATAAACAAGCATATCCACGTCATTCGTTGAGTCTTGCTGCCCTTATGACCAATGACAGTCCAATATTTTTGCTTGATGCATTCACCACTCTGATTGTATTTTACGCATCCACTGCCGACCCATCACAGTTTCCTCCACCCATCATTGTTTATTA 578 0.4654 MQFLTAQNIRELYDCVEPEVVLCLLVHKVMLASLKEGVREGRVLLHDWLVILVAQYNDDYKLVPYSSGSSISSQIDVTFSQSPQMQPLPRLVFALLRNPLLRCHEGVHPDYRIFLQCLFSALEPSSLHRAVYPMMTSYSTPDKQAYPRHSLSLAALMTNDSPIFLLDAFTTLIVFYASTADPSQFPPPIIVY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02248 192 PANTHER SEC24-RELATED PROTEIN 1 188 - -
Bva07g02248 192 Pfam Sec23/Sec24 helical domain 18 128 IPR006900 GO:0006886|GO:0006888|GO:0030127
Bva07g02248 192 SUPERFAMILY Helical domain of Sec23/24 19 132 IPR036175 GO:0006886|GO:0006888|GO:0030127
Bva07g02248 192 Gene3D Sec23/Sec24 helical domain 1 146 - -
Bva07g02248 192 PANTHER OS05G0443300 PROTEIN 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02248 Bva-Chr7 18622305 18623869 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02248 - - jre:109020880 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02248 07 18622305 18623869 Bva07g02248 07 18622305 18623869 ECH