Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02228 ATGGCACCAAGGAAAGCTCGCGAGCGTGAAATGCTCGTAGAGTCCATGTACTCAGTCATTGCGCTCGTCTTGGTCCTCGTTGCGGGCGTAGAGCTCTGTGACGCCGCCAGCGTAGTCAACGTCTACCGGCTTATTCAGTACGATATGTCTGGAGTTCCGTTTGGATCTCGACTTGCTAGCCTCAATCACCATGCCAGTGCTCTACCTTTCTCTCCACAAGCTGATCTCTCGCGTACCGTGCTCATGATTCCACTTCGCGAATTAGACATGAACTTTGTCAAAGAATATATTGCTGAAAGAAAGCCTCTGGGgggtttattatttttgctgCCCCAAATATTCAgttttgaaaatcaagctGGCAGAAATAATCATCGAGATAATGGTAAAGAGCTTCTTGAGAATGTGTTAGCTGAACTTGAACAGATACTGATACACACCAACTTACCTTATCCCATATATTTTGCTTTTGAGGATGACAACGTTAATTCTGTCTTGACTGATATCAAGAAGAATGATGCTACTGGTCAGCCTGCTACTGCAACTACTGGCGGGTACAAGTTTGTCGTTTCAGCTCCTGAACCAAAGAAAGTTGTATCTCCCACCATTACGAATATTCAGGGATGGTTGGCTGGACTGAAGACAGATGATGAGGCTAGTCAGTTACCAACCATCGCTATAGTGGCATCATATGACACTTTTGGGGCTGCTCCTGCATTATCTGTGGGAAGTGATAGCAACGGAAGTGGTGTTGTGGCACTTCTTGAAGTAGCTAGGTTGTTCTCTCTTCTCTATTCTAATCCAAAGACCAGAGGACGATACAATCTACTTTTTGGGCTAACATCTGGTGGACCTTACAACTTTAATGGGACTCGTAAGTGGCTTTGGAACTTCGATCAACGTTTGCGTGAGAGCATTGACTATGCTATTTGCTTAAATGGTATTGGCTCATGGGAAAATGATTTGTGGATTCACGTCTCTAAGCCCCCAGAAAATGCCtatattaaacaaatattgGAAGATTTTTCTAGCGTGGCCGAAGAGTTGGGCTTTAAAGTGAATCCAAggcacaagaaaataaatatttcaaatcccCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAATTACTGCTGCCACGCTCTCTGAACTCCATACTGCACCTGAATTGCTAGAAAGGACTGGTGGTTTGGTTGACAGCAGGCATTTTGTCAATGACGAAGCAATCGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGGGAGACATATTTACGGACGTCAAGGAAAGAACATCCAGATCTTTGCGGATAACAGTAAATTGGCAGTAAATCCTTCTTATATTCGTTCATGGTTAGATGTTTTGTCACGAACACCTCGAGTAGCTCCTTTTCTCACAAAAGATGCTCCTTTTGTCATGGCACTTAAAAAGGAATTAGAAGACCATACGGACGAGGTCAATTTGCAACGAGAAGTGTTGGACGGGATTTTCACTTTCTATGATTCAACTAGTGCTTTGCTAAATGTATATCAGGTCGCTAGCGTCACGTTTGACTTATTGTTACTTCTAGTATCGGGATCATATTTGATCGTGCTCTTCAGTTTTCTCGTCATCACAACTAGGGGTATTGATGATCTATTCAGTTTATTTCGGCGACATCCCTCTCGTAAAGTGAAGACCACATG 1694 0.4185 MAPRKAREREMLVESMYSVIALVLVLVAGVELCDAASVVNVYRLIQYDMSGVPFGSRLASLNHHASALPFSPQADLSRTVLMIPLRELDMNFVKEYIAERKPLGGLLFLLPQIFSFENQAGRNNHRDNGKELLENVLAELEQILIHTNLPYPIYFAFEDDNVNSVLTDIKKNDATGQPATATTGGYKFVVSAPEPKKVVSPTITNIQGWLAGLKTDDEASQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNLLFGLTSGGPYNFNGTRKWLWNFDQRLRESIDYAICLNGIGSWENDLWIHVSKPPENAYIKQILEDFSSVAEELGFKVNPRHKKINISNPRVAWEHEQFSRLRITAATLSELHTAPELLERTGGLVDSRHFVNDEAIVRSVKLIAESLGRHIYGRQGKNIQIFADNSKLAVNPSYIRSWLDVLSRTPRVAPFLTKDAPFVMALKKELEDHTDEVNLQREVLDGIFTFYDSTSALLNVYQVASVTFDLLLLLVSGSYLIVLFSFLVITTRGIDDLFSLFRRHPSRKVKTT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02228 564 CDD M28_nicalin_like 137 429 - -
Bva07g02228 564 Pfam Nicastrin 225 361 - -
Bva07g02228 564 PANTHER NICALIN 6 563 - -
Bva07g02228 564 Gene3D Zn peptidases 136 419 - -
Bva07g02228 564 PANTHER NICALIN 6 563 IPR016574 GO:0009966|GO:0016020
Bva07g02228 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Bva07g02228 564 SUPERFAMILY Zn-dependent exopeptidases 189 424 - -
Bva07g02228 564 Coils Coil 475 495 - -
Bva07g02228 564 PIRSF Nicalin 2 559 IPR016574 GO:0009966|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02228 Bva-Chr7 18548748 18555762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02228 5 562 EF-hand Containing Proteins AT3G44330 70.968 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02228 - - gmx:100778865 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02228 07 18548748 18555762 Bva07g02228 07 18548748 18555762 ECH