Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02154 ATGGTCATAAACCTCCCCTACTCTCCACCTTCATATTCCAGCTCCATCATCAGATTAACCAATTCAAAGTCACCCATCTCCGAACCTTCATTCAAACTCAAAACCCACTTTCCGAAACcatattcttcttctatatGCTTTTCATTTGCTTCACCAAATATCAGTCCCAGCTGCCACAGGCGTTTTTTCTGCGAGAAGAACAGATTTACACACGGGAATAGGTTGGATTTTAGGTCTTGGGCCATCCCTGGTTTTGATTATGGCAACTTTGAAGGTCCTCAGTCTGTAATAGAGGCAGCTGCAGTTTTGACGGCCATTATTGTTGTTCACGAGAGCGGTCACTTCCTTGCTGCTTATCTCCAAGGCATCCACGTGAGTAAATTTGCAGTTGGTTTTGGTCCAATTTTAGCTAAGTTCAACTCAAACAATGTAGAATATTCCCTTAGAGCTTTTCCTCTTGGTGGGTTTGTGGGGTTTCCTGATAATGATCCGGATAGTGGTATTCCAGCTGATGATGAAAATTTGCTTAAGAATAGACCAATATTGGATAGGGTAATTGTAGTTTCAGCTGGTGTTGTTGCTAATATTGTTTTCGCACTGGTGATCATCTTTGTTCAAGTCCTGTCTGTTGGTTTGCCCGAGCAAGAGGTCTTTCCCGGGGTGATCGTACCCGAAGTTCGACCCTTTTCAGCTGCTTCTCGGGATGGGCTGATTCCTGGTGATGTGATTCTCGAGATTAATGGAAGTGAATTTCCTAAACCAGGTCCAAGCGCAGTTTCTGAAGTTGTTGATGTCATTAAGAAGAATCCAAAGAGATACGTGTTACTCAAGGTTAAGAGAGGAcaggaaaattttgaaattgggGTGACCCCGGATGAAAATTATGATGGAACTGGTAAAATCGGAGTTCAGCTATCACCAAATGCAAAAGTAGTAAAAGTTAGACCAAAGAATTTGTTGGAGGCTATAAACTTTACTGGCAAAGAATTTTGGGGTCTGACATCTAATGTTCTAGATGGCTTAAGGCAGACATTTTTAAACTTCTCACAGTCAGCCAGTAAAGTTTCTGGTCCCGTAGCCATTATTGCCGTTGGTGCAGAAGTTGCACGGTCAAACATTGACGGGCTATATCAATTTGCTGCTGCGATCAATCTTAACCTTGCCGTTATAAACCTGCTCCCCTTACCTGCTTTAGATGGGGGTACATTGGCTTTGATCCTCATTGAGGCAGCCAGGGGAGGGAGAAAGCTTCCACTGGAAGTGGAGCAACGGATCATGTCATCAGGGATTATGCTCGTTATACTTCTTGGGTTATTCCTTATTGTTCGCGATACCCTAAACCTGGATTTCATCAAAGAGTTGTTATA 1367 0.4206 MVINLPYSPPSYSSSIIRLTNSKSPISEPSFKLKTHFPKPYSSSICFSFASPNISPSCHRRFFCEKNRFTHGNRLDFRSWAIPGFDYGNFEGPQSVIEAAAVLTAIIVVHESGHFLAAYLQGIHVSKFAVGFGPILAKFNSNNVEYSLRAFPLGGFVGFPDNDPDSGIPADDENLLKNRPILDRVIVVSAGVVANIVFALVIIFVQVLSVGLPEQEVFPGVIVPEVRPFSAASRDGLIPGDVILEINGSEFPKPGPSAVSEVVDVIKKNPKRYVLLKVKRGQENFEIGVTPDENYDGTGKIGVQLSPNAKVVKVRPKNLLEAINFTGKEFWGLTSNVLDGLRQTFLNFSQSASKVSGPVAIIAVGAEVARSNIDGLYQFAAAINLNLAVINLLPLPALDGGTLALILIEAARGGRKLPLEVEQRIMSSGIMLVILLGLFLIVRDTLNLDFIKELL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02154 455 PANTHER REGULATOR OF SIGMA-E PROTEASE RSEP 26 455 IPR004387 GO:0004222|GO:0006508|GO:0016021
Bva07g02154 455 CDD S2P-M50_PDZ_RseP-like 96 447 - -
Bva07g02154 455 SMART pdz_new 208 282 IPR001478 GO:0005515
Bva07g02154 455 SUPERFAMILY PDZ domain-like 180 282 IPR036034 GO:0005515
Bva07g02154 455 Gene3D - 212 306 IPR036034 GO:0005515
Bva07g02154 455 PANTHER MEMBRANE METALLOPROTEASE ARASP2, CHLOROPLASTIC-RELATED 26 455 - -
Bva07g02154 455 ProSiteProfiles PDZ domain profile. 220 281 IPR001478 GO:0005515
Bva07g02154 455 CDD PDZ_metalloprotease 208 291 - -
Bva07g02154 455 Pfam Peptidase family M50 100 436 IPR008915 GO:0004222|GO:0006508
Bva07g02154 455 Pfam PDZ domain 223 280 IPR041489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02154 Bva-Chr7 18153128 18154958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02154 - - lang:109351773 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02154 07 18153128 18154958 Bva07g02154 07 18153128 18154958 ECH