Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02097 ATGGCCGGGATTGGCAAAGGTGTTGGCTTTGAGGATTTGCTGCCTGTCATCGCCGATAAACTTGGAGGTGAAGGTTTGATAAACGAGCTCTGTAGTGGGTTCCAATTGCTGATGGACAAGGATAAAGGAGTGATCACCTTGGATAGCTTGAGGAGCAACTCTGCTCTTCTGGGTTTGCAGGATTTGAAGGAGGATGAGCTGGCGAGCATGATGAAGGAAGGAGATCTCGACGGCGACGGTTCCCTCTCTCAGATGGAATTCTGCGTTTTGATGTTCAGATTGAGTCCTGAATTGATGGAGGAGTCCTGGTTTTGGCTCGAACAGGCTCTCCAACACGAACTCAACAACTG 350 0.4943 MAGIGKGVGFEDLLPVIADKLGGEGLINELCSGFQLLMDKDKGVITLDSLRSNSALLGLQDLKEDELASMMKEGDLDGDGSLSQMEFCVLMFRLSPELMEESWFWLEQALQHELNN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02097 116 SUPERFAMILY EF-hand 25 103 IPR011992 -
Bva07g02097 116 SMART efh_1 66 94 IPR002048 GO:0005509
Bva07g02097 116 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Bva07g02097 116 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Bva07g02097 116 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 115 - -
Bva07g02097 116 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Bva07g02097 116 PANTHER CALCIUM-BINDING PROTEIN KIC 1 115 IPR044205 GO:0005509
Bva07g02097 116 Gene3D - 8 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02097 Bva-Chr7 17879723 17880689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02097 10 114 EF-hand Containing Proteins AT5G54490 61.321 5.78e-42 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02097 K24345 - gmx:100808976 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02097 07 17879723 17880689 Bva07g02097 07 17879723 17880689 ECH