Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02062 atgaGGCGAAGGGGGTCGGATTTTAGAAGGCGAAAGAGGTTCCCGGATGTGCTGTGGTGGGCATTGTGTAGCTTTGTGGTTCTTCTTTTTATCTGTATACTTAGCAGAGGGAGTCAGATAGAGTCCAGGCCCGCTTTATCCAAGAGGGCCTACAGGCATGATAGGATTATGGAAGGCCTTAACATTACTGAAGAGATGTTAAGTCCTAACTCAGTGACTAGACAATTGAATGATCAGATATCTCTCGCAAAAGCTTTTGTTGTCATAGCAAAAGAGAGCAATAATCTCCAATTTGCCTGGGAATTAAGTGCCCAGATCCGGAATTCACAGATTCTCCTCTCAAATGCTGCCACAAGGAGAGCTCCGTTGACAACCAGAGAATCAGAAAGTGCGGTGCGTGATATGGCATTATTGCTATACCAGGCTCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGACTAAAAGCCAAAATTCAATCTCTTGACGAACAGATGAATTCTGTTACTGAGAAGAGTCAAAAATATGGACAAATAGCTGCTGAAGAAGTCCCGAAATCCCTGTACTGCCTTGGTGTTCGCTTGACAACTGAATGGTTCAGAAGCCCTAATTTGCAGAAAAAACTGAAAGAGAAAAGGCAGGTGGAGATGAAGCTTAAAGATAACAaccttttccatttttgtgtGTTCTCTGATAACATTCTTGCTACTTCAGTTGTTGTCAACTCAACTGCATTAAATTCCATAGATCCAGAGAATATTGTTTTCCACCTCGTCActgatgaaataaattatgctGCAATGAAGGCATGGTTTGCTATGAACGATTTCCGTGGGGTGACTGTGGAtgttcaaaaatttgaagactTCAGTTGGCTTAATGCTTCTTATGTTCCTGTTCTTAAGCAACTTCAAGACTCGGAAATCCAGAACTACTATTTCTCTGGTAACAGTGATGATGGCCGGACACCGATAAAGTTTCGTAACCCTAAATATCTCTCCATGCTTAACCATCTGCGGTTTTATATCCCTGAAGTATTTCCTGCACTGAAGAAGGTGGTGTTTCTTGATGATGACATTGTGGTTCGGAAGGATCTCTCTGCTCTTTTCTCCATTGATTTGAATGGCAATGTTAATGGAGCAGTTGAGACTTGCATGGAGACATTTCATAGATACCATAAGTATTTGAATTACTCTCATCCTCTTATACGAGCACATTTTGATCCTGATGCGTGTGGATGGGCGTTTGGGatgaatatatttgatttggttgaatGGAGGAAAAGGAATGTAACAGGAATCTACCACTACTGGCAGGAAAAGAATGTGGATCGGACATTGTGGAAACTTGGTACCTTGCCACCCGGACTGCTAACATTTTATGGATTGACTGAGCCGTTGGATCCGTCGTGGCATGTCTTGGGGTTTGGCTACACAAATATTGATCCTCAGTTGATAGAGAGTGGGGCTGTGCTGCACTTTAACGGGAATTCTAAACCATGGTTGAAGATTGGGATGGAAAAGTACAAGCCATTGTGGGAAAAATATGTTGATTATTCCCATCCTTTGTTACAACAATGCAACTTCCATTG 1595 0.405 MRRRGSDFRRRKRFPDVLWWALCSFVVLLFICILSRGSQIESRPALSKRAYRHDRIMEGLNITEEMLSPNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRAPLTTRESESAVRDMALLLYQAQQLHYDSATMIMRLKAKIQSLDEQMNSVTEKSQKYGQIAAEEVPKSLYCLGVRLTTEWFRSPNLQKKLKEKRQVEMKLKDNNLFHFCVFSDNILATSVVVNSTALNSIDPENIVFHLVTDEINYAAMKAWFAMNDFRGVTVDVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGNSDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDIVVRKDLSALFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNIDPQLIESGAVLHFNGNSKPWLKIGMEKYKPLWEKYVDYSHPLLQQCNFH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02062 531 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 529 IPR029044 -
Bva07g02062 531 CDD GT8_like_1 226 519 - -
Bva07g02062 531 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 531 - -
Bva07g02062 531 Pfam Glycosyl transferase family 8 232 505 IPR002495 GO:0016757
Bva07g02062 531 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 227 524 IPR029044 -
Bva07g02062 531 Coils Coil 153 173 - -
Bva07g02062 531 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 531 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02062 Bva-Chr7 17697215 17698672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02062 1 531 Glycosyltransferase AT2G20810 80.037 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02062 K13648 - gmx:100792018 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00569 09 3049643 3053430 Bva07g02062 07 17697215 17698672 BWGD