Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02054 ATGGTGAAGTTTTTCTCGGAGCTTCCTGTTGATGACCCTCACGAAGATTCCAAGCTCAACAATTCAAAAGATTCTCACGAGACTATTGAGACGCAAGTGAACGACTTTTCATTGGCTGATTCcttctttgattttgattctatAGAGGATTATTTCGAAGATAAACTAACTGCAGACATGGCTGCCCAAGAGAATAGCAACGTAGAAGTTGAAGACAAGTCTAATAAGATAGTTAAGGACGAATGTTCTGAAGAAACTACCGTCTTAGACCAACAGATGCTTACCGGTTCTGAGTCTATTTTTGGCTTTACCAGCTGCCATAAAGAGTCTGAGTCAGTTGGGTCTACTAGTTTGGTCAAAATTGAAGCAGGGGAGAGTGAAAAGCTGGGGACTTCAAGTTGCACTATTGAAGATGGTTTGGGGAAAATTAGTTTAGTTGGTAGTTCTCAACGTTCAGTTATAATTGATCGGAAGAGTGAGATTTTGATTGATGAGCACGAGAATGAAAGTTCAGAGTCGGAATCTGCTGATCCATCTTCGCCTTCATCTTCAAGTTCACATCACACTGATAGTGATAGTGGTAGTACCTCAAGTGATGATACCGAGGACGACAAGGATGACAATGAGGAGGAggagaaagggaaagagaatACAGAACATAATGACGTGGAAATTGAAGAAGGAGAGATAAGAGATTTTGCAGGAGAAAATCTGGTTACTGAAACAACAACTGCTTCGACTGATGAAGAAGATGTAGAGAAGATGGTCAGTTGGAGTGGCATTAATGATGACGATGTTGATGACTTTGacgatgaagatgaagatggtAGTAGACATGCTACAAAAGGACCTATTAGGTCAAAGAATGAGCTTGAGGTTCTTCCTCCAGTTCCTTCAGTGGATATTACCTTACAACCACACCATCAAATGCTGGCAGTTGGAGTTGTTATGTCGATTCTTGGTGCCCAAGTCATTGTTGAAGGGGTGGAGAAGCACGACCCTCTTAATGAAGGTTCGATTCTCTGGATTACAGAAAGCAGAAGACCACTTGGGTTAGTTGATGAAATCTTTGGACCTGTCAAAAACCCTTATTATGTTGTGAGGTACAACTCTGAAAATGAAATCCCGGAGGGAATCCATGTGGGCAGTAAGATCTCTTTTGTTCCAGAGTTTGCGGATCATGTGCTTAATAACAAGGATCTTTACAAGAAAGGATATGATGCATCTGGTGCGAATGATGAAGAGATGACTGATGAAGAAATGTTTTCAGATGACGAGAAAGAGGCTGAATTAGCGAGATCGCTTAGAATGACTAAGAGAGGCATTAATGATCAGAATCCTAGAAAGATGAGGAACAATAGAAAGAAAGTACCCCAAAAAGAGGGTGTGGTACCTACCTACCCTGTTGGGCCTGCCGCAACATCTTCTGGTCATGGAAATTGTTCAACCTTTTTAGGCACCGGACAAGGTACCTTAGTTCCTCCATTTCAACCCGCGACCGCTGGTCTTAATCCACTTACAAATGGAATTTGGACAAATTGGACATTTCCGCAGCCTCAATCTTCTATGTTTCCTAATGCATTAACTTCTAtgtttcttcaagaaaatactcaaaattcTTATCAGTTACCAGTGCCAGGAATTCCATTTCAACAGCAGGTAAATCTCGCTCAAGCTTCACTTCCAACAACCATATTACCTGGGATGCAGCCCAATATATATCGACAACCCATGTTTCCACCGGGGCTTGTGAATCAAAATCAGATGACATTTGGTCTAAGCCCACACCCTGCACAGATGCAGCCACCTTTGTGTGCAGAACAAGGTTTTTTGTCTAATGAATGGttagaaagaaacaataatcCACAGATGCAGCCACCTCCACATATGCATTCCGGTACTAATCCAGCCTGTCCTTGTGCTCCCCATCAATTTCGTCGAGGCAAACCTACTAATCGTGGGAGAAAAGCATTTCATAGAGGAGGGAGGAAAGGCTGGCGACCAGCCTA 2009 0.4062 MVKFFSELPVDDPHEDSKLNNSKDSHETIETQVNDFSLADSFFDFDSIEDYFEDKLTADMAAQENSNVEVEDKSNKIVKDECSEETTVLDQQMLTGSESIFGFTSCHKESESVGSTSLVKIEAGESEKLGTSSCTIEDGLGKISLVGSSQRSVIIDRKSEILIDEHENESSESESADPSSPSSSSSHHTDSDSGSTSSDDTEDDKDDNEEEEKGKENTEHNDVEIEEGEIRDFAGENLVTETTTASTDEEDVEKMVSWSGINDDDVDDFDDEDEDGSRHATKGPIRSKNELEVLPPVPSVDITLQPHHQMLAVGVVMSILGAQVIVEGVEKHDPLNEGSILWITESRRPLGLVDEIFGPVKNPYYVVRYNSENEIPEGIHVGSKISFVPEFADHVLNNKDLYKKGYDASGANDEEMTDEEMFSDDEKEAELARSLRMTKRGINDQNPRKMRNNRKKVPQKEGVVPTYPVGPAATSSGHGNCSTFLGTGQGTLVPPFQPATAGLNPLTNGIWTNWTFPQPQSSMFPNALTSMFLQENTQNSYQLPVPGIPFQQQVNLAQASLPTTILPGMQPNIYRQPMFPPGLVNQNQMTFGLSPHPAQMQPPLCAEQGFLSNEWLERNNNPQMQPPPHMHSGTNPACPCAPHQFRRGKPTNRGRKAFHRGGRKGWRPA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02054 669 Pfam Gar1/Naf1 RNA binding region 312 392 IPR007504 GO:0001522|GO:0042254
Bva07g02054 669 MobiDBLite consensus disorder prediction 642 669 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 160 285 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 648 669 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 443 465 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 174 192 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 247 261 - -
Bva07g02054 669 Gene3D Probable tRNA pseudouridine synthase domain 282 388 IPR038664 -
Bva07g02054 669 MobiDBLite consensus disorder prediction 196 210 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 1 26 - -
Bva07g02054 669 SUPERFAMILY Translation proteins 311 384 IPR009000 -
Bva07g02054 669 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 35 664 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Bva07g02054 669 MobiDBLite consensus disorder prediction 211 234 - -
Bva07g02054 669 MobiDBLite consensus disorder prediction 8 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02054 Bva-Chr7 17667664 17670794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02054 K14763 - gmx:102660668 466.848