Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02052 aTGAGTCTACACAATTCCAATCCTTTCGATGAAGAAAATGTTAATCCATTTGCGAACCCTGGAAGTGCTCCCTCTTCAAACTCCAGGTTGTCACCCCTTTCTCCTGAGCCTCGTAATCGTGGAGCAACTACTGATATTCCTCTTGATCCCTTAAAGGACCTCAAAGCAAAGGAGAAAGAACTTCAAGCTAGAGAGGCTGAATTGAAAAGGAGGGAACAGGAACTAAAACGTAAGGAAGACGCTATAGCAGGAGCTGGAATAGtcatagaggaaaaaaattggcCACCTTTTCTCCCTATCATTCATCATGACATCCCAAATGAAATACCTGTACACCTTCAGAGTATCCAATATGTTGCGTTCACAACTTTGTTGGGTTTGGTCCTGTGTCTTTTGTGGAATGTTGTGGCAGTTACTGTTGCATGGATCAAGGGGGAAGGTCCAACAATCTGGCTTCTTGCTGTCATCTACCTTATTTCTGGCGTTCCAGGAGCTTATGTGTGTTGGTATCGGCCACTTTATCGTGCTACGAGGACTGACAGCGCTCTGAAGTTTGGCTGGTTTTTATTGTCTTACATGATGCACATCGGTTTTTGTGTTTTGGCTGCAATTGCTCCTCCAATTATCTTCAAAGGAAAATCTCTCGCAGGTATTTTGGCTGCACTAGATATGATGGAAGACAATACGTTGGCTGGGatattctattttattgggGCTGGGCTTTTCTGCGTTGAATCTTTGCTGAGCATTTGGGTTAttcagCAAGTATACATGTATTTCCGTGGCACTGGCAAGGCAGCAGACATGAAGCGTGAGGCTGCAAGGAGGACCATGATGGTAGCTCTATG 848 0.4269 MSLHNSNPFDEENVNPFANPGSAPSSNSRLSPLSPEPRNRGATTDIPLDPLKDLKAKEKELQAREAELKRREQELKRKEDAIAGAGIVIEEKNWPPFLPIIHHDIPNEIPVHLQSIQYVAFTTLLGLVLCLLWNVVAVTVAWIKGEGPTIWLLAVIYLISGVPGAYVCWYRPLYRATRTDSALKFGWFLLSYMMHIGFCVLAAIAPPIIFKGKSLAGILAALDMMEDNTLAGIFYFIGAGLFCVESLLSIWVIQQVYMYFRGTGKAADMKREAARRTMMVAL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02052 282 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 19 282 IPR007273 GO:0015031|GO:0016021
Bva07g02052 282 MobiDBLite consensus disorder prediction 1 51 - -
Bva07g02052 282 Coils Coil 51 81 - -
Bva07g02052 282 MobiDBLite consensus disorder prediction 1 38 - -
Bva07g02052 282 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 19 282 - -
Bva07g02052 282 Pfam SCAMP family 91 263 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02052 Bva-Chr7 17660156 17664345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02052 4 282 Miscellaneous Gene Families AT1G11180 67.247 1.02e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02052 K19995 - twl:119990885 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00580 09 3086400 3090232 Bva07g02052 07 17660156 17664345 BWGD