Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02008 ATGGTGGGCGGAAACAGTCTGTTTTACCCTATTGCTGGTTTTGCCTCATGTTTGCTTTTCATTTACTTGTCTTTTGGAGACTTAAGGGTGAAAATCTACGAAGAACCAAAATTGTCTTTTGTGGTGAGAAATGGATCTCAATTTATGTTGGATGGAAGAGCGTTCTACATAAATGGATGGAATTCTTATTGGTTAATGGTCCATTCTGTGGATTATAATACCAGACCCAGGGTTCGTGAAATGTTCCAAGCAGGCGCGAAGATGGGTCTCACTGTTTGTCGAACTTGGGCATTTAATGAAGGTGACTATAATGCTCTCCAGACTTCCCCAGGTCGGTTCAATGAGCAAGTTTTCAAGGCTTTGGATCATGTCATAGCAGAAGCAAGGCAACACGGAATAAGGCTGCTCCTTAGTTTAGTTAATAACTTGCAAGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGGAAGAAGGGATAGGATTGAGCTCATCTAatgattctttcttctttgatccATCCATCCGAAGTTATTTCAAGAATTATGTCAAGATTCTTCTGATGAGGAAAAATACTATCACCGGAGTTGAATATAGAAATGATCCCACCATATTTGGCTGGGAGTTGATTAACGAACCTCGTTGCATGGCTGATCCATCAGGTGATACTCTCCAAGAGTGGTTGGAAGAGATGTCAACTTTCGTCAAATTGCTCGACAAGAATCATCTGGTGACAATTGGCCTTGAGGGCTTTTATGGTCCTAAAGACCCTAAAAGGTTGACTGTCAACCCAGAGGATTGGGCGTCCAAGCTTGGATCTGATTTTATCCGTAACTCCAATATCTCAAATATTGATTTCACCTCTGTGCATATCTATCCTGATCATTGgTTTCATGAGCAAACATTTGAAGACAAACTGAAATATGTATCGAAGTGGATGCGTTCTCACATTGAAGATGGTGACAAAATATTGAACAGGCCTGTCTTGTTCTCTGAATATGGATATTCGGATTTGAATGAGAACTATTCACCATCTGACCGAGATAAGTTTTACAAAGTAGTTTTAGATATAATCTACAAATCTGCTAAGAGAAACAAATCTGGAGCAGGTGCTTTGGTATGGCAGTTCTTGGTTGGAGGAATGCCAGAGTTCAATGATGATTTTGGTATGGTCCCGTGGGAAAGGCCAGCAACCTATAAACTATTTGTTGAACAATCATGCAGATTGGTAAAAGTTAACGGATGGACTCAACAGGATAAAAGTTTCAAAGCATTGTGTTA 1283 0.3959 MVGGNSLFYPIAGFASCLLFIYLSFGDLRVKIYEEPKLSFVVRNGSQFMLDGRAFYINGWNSYWLMVHSVDYNTRPRVREMFQAGAKMGLTVCRTWAFNEGDYNALQTSPGRFNEQVFKALDHVIAEARQHGIRLLLSLVNNLQAYGGKTQYVKWAWEEGIGLSSSNDSFFFDPSIRSYFKNYVKILLMRKNTITGVEYRNDPTIFGWELINEPRCMADPSGDTLQEWLEEMSTFVKLLDKNHLVTIGLEGFYGPKDPKRLTVNPEDWASKLGSDFIRNSNISNIDFTSVHIYPDHWFHEQTFEDKLKYVSKWMRSHIEDGDKILNRPVLFSEYGYSDLNENYSPSDRDKFYKVVLDIIYKSAKRNKSGAGALVWQFLVGGMPEFNDDFGMVPWERPATYKLFVEQSCRLVKVNGWTQQDKSFKALC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02008 427 PANTHER - 4 427 IPR045053 GO:0004553
Bva07g02008 427 Gene3D Glycosidases 37 414 - -
Bva07g02008 427 Pfam Cellulase (glycosyl hydrolase family 5) 71 376 IPR001547 GO:0004553|GO:0071704
Bva07g02008 427 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 427 - -
Bva07g02008 427 SUPERFAMILY (Trans)glycosidases 40 404 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02008 Bva-Chr7 17485395 17489822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02008 4 427 Glycoside Hydrolase AT2G20680 68.632 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02008 K19355 - gmx:100806003 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02008 07 17485395 17489822 Bva07g02008 07 17485395 17489822 ECH