Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01922 ATGGCTTCGAAAATTCCTCTCCCCTGTATTTTATtggctttgtttttcttgtttgccTTCTTGGCTTTTGAAGCCACTTCTCTCACTCTTGAAGAAGTCTTAGTGCACGAGAAGCATGAGCAATGGATGGCTCGCTATGGAATAGTCTATAAGGATTCCCAAGAGATGCAGAAGCGTTTCGACGTATTCAAGGCCAATGTGGAATACATAGAAGCCTCTAACAATGCAGCAAACAAACCTTACAAGCTAGCCATCAACAAATTTGCAGATCTCACAAACGAGGAGTTCGTAGCGTCCAGAAACAGATTCAAGGGCCATATGTGCTCCACAATCACCAGGACATCCACATTCAAATATGAAAGTGTCACTGCAGTTCCATCCACCGTGGACTGGAGAAAGAAAGGTGCTGTAACACCTATCAAGGACCAAGGCCAATGTGGGTGCTGCTGGGCTTTTTCTGCGGTGGCAGCAACTGAAGGAATCACTAAGCTTACCACAGGCAAACTCATTTCTTTGTCAGAACAAGAGCTCGTAGATTGTGACAAGAAAAGTGTAGACCAAGGTTGCGAAGGTGGTCTAATGGACGATGCCTTTAAATTCATCACACAGAATAAGGGTATTAGCACAGAAACCAACTATCCTTACCAGGGTGTTGATGGAACCTGTAACACAAACAAAGAAGCCAACATTGCTGCAACAATTAAAGGGTATGAAGATGTGCCTGCTAACGATGAGCAGGCACTGCAGAAAGCTGTGGCCAATCAACCAATTTCTGTAGCCATAGATGCCAGTGGCTCTGACTTCCAATTTTACTCAAGTGGTGTATTCACTGGTTCATGTGGGACTGAGTTGGATCATGGTGTCACTGCCGTGGGATATGGGGAAAGTGATGGGACCAAGTATTGGTTGGTGAAGAACTCATGGGGAACACAGTGGGGTGAACAAGGATACATCAGGATGCAGAAGGATGTGGATGCCAAACAAGGCCTCTGTGGCATAGCAATGCAAGCTTCTTATCCCACAGCATA 1028 0.4446 MASKIPLPCILLALFFLFAFLAFEATSLTLEEVLVHEKHEQWMARYGIVYKDSQEMQKRFDVFKANVEYIEASNNAANKPYKLAINKFADLTNEEFVASRNRFKGHMCSTITRTSTFKYESVTAVPSTVDWRKKGAVTPIKDQGQCGCCWAFSAVAATEGITKLTTGKLISLSEQELVDCDKKSVDQGCEGGLMDDAFKFITQNKGISTETNYPYQGVDGTCNTNKEANIAATIKGYEDVPANDEQALQKAVANQPISVAIDASGSDFQFYSSGVFTGSCGTELDHGVTAVGYGESDGTKYWLVKNSWGTQWGEQGYIRMQKDVDAKQGLCGIAMQASYPTA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01922 342 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Bva07g01922 342 PRINTS Papain cysteine protease (C1) family signature 143 158 IPR000668 GO:0006508|GO:0008234
Bva07g01922 342 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Bva07g01922 342 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Bva07g01922 342 SMART Inhibitor_I29_2 39 96 IPR013201 -
Bva07g01922 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Bva07g01922 342 Gene3D Cysteine proteinases 21 342 - -
Bva07g01922 342 SUPERFAMILY Cysteine proteinases 33 341 IPR038765 -
Bva07g01922 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 143 154 IPR000169 -
Bva07g01922 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 341 - -
Bva07g01922 342 CDD Peptidase_C1A 126 340 IPR039417 -
Bva07g01922 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Bva07g01922 342 PANTHER - 24 341 - -
Bva07g01922 342 SMART pept_c1 125 341 IPR000668 GO:0006508|GO:0008234
Bva07g01922 342 Pfam Papain family cysteine protease 125 341 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01922 Bva-Chr7 17118650 17119767 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01922 - K16292 gmx:102666929 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01922 07 17118650 17119767 Bva07g01922 07 17118650 17119767 ECH