Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01898 ATGGCTTCCATAAGCCAAAACCCATGTATATTAGCTCTGTTGCTCTTTCTCTCAGCTTTCACTTCTCAGGTAATGAGCCGTGAGCTGCAAGAAACATCCCTATCGAATAGGCATGAGCAATGGATGGCAAAATATGGTAAAGTGTACAATGATGCTGCAGAAAAGGAGAAACGTTTTCAGATATTCAAGGACAATGTGGCATTCATCGAATCATTCAATGCTGCTGGGAACAAACCTTACAAGCTTGCCATTAACCAATTTGCTGACCAAACCAACGATGAATTTAAGGTTTCCCGTAATGGATACTTTCATCGACTGAGTTCCACAACAGAATCATCATTCAAGTATGAAGATGAAACTGCCATTCCTGCCACCATAGATTGGAGGAAGAAAGGAGCTGTTACTCCCATCAAGGACCAAGGCCAATGCGGTAGCTGCTGGGCATTTTCAACTATTGCTGCAACAGAAGGCATCCACCAAATAACTACAGGTAAACTAGTTTCCCTCTCAGAGCAAGAACTAGTGGACTGTGATACCAAAGGTGTTGACCAAGGATGTATGGGTGGCCTCATGGAAGATGGGTttgaatttatcataaaaaatggaGGAATCACAACTGAAGCAAATTACCCCTACAAGGCAGCTGATGGGACTTGTAGTACCAAGGAAGAAATCCCCGTTGCAGCTAAGATTAAAGGCTACGAGAGAGTTCCTGCTAATAGCGAAGCCGCGCTGCTCAAAGCTGTGGCTAACCAGCCAGTATCAGTTTCTATTGATGCTAGTGGTTCTGCTTTCCAATTTTACTCAAGTGGGGTTTTTACTGGAGAATGTGGAACTGAGCTAGACCATGGTGTTACAGCAGTGGGTTATGGTACAGCTGATGATGGTACCAAGTATTGGCTGGTAAAGAACTCATGGGGCACTCAATGGGGAGAACAAGGATACATAAGGATGCAGAGAGGGATTGACGCTAAGGAAGGTATATGTGGTATTGCCATGGATGCCTCTTATCCAACTGCTTG 1022 0.4364 MASISQNPCILALLLFLSAFTSQVMSRELQETSLSNRHEQWMAKYGKVYNDAAEKEKRFQIFKDNVAFIESFNAAGNKPYKLAINQFADQTNDEFKVSRNGYFHRLSSTTESSFKYEDETAIPATIDWRKKGAVTPIKDQGQCGSCWAFSTIAATEGIHQITTGKLVSLSEQELVDCDTKGVDQGCMGGLMEDGFEFIIKNGGITTEANYPYKAADGTCSTKEEIPVAAKIKGYERVPANSEAALLKAVANQPVSVSIDASGSAFQFYSSGVFTGECGTELDHGVTAVGYGTADDGTKYWLVKNSWGTQWGEQGYIRMQRGIDAKEGICGIAMDASYPTA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01898 340 SMART pept_c1 122 339 IPR000668 GO:0006508|GO:0008234
Bva07g01898 340 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Bva07g01898 340 PRINTS Papain cysteine protease (C1) family signature 299 305 IPR000668 GO:0006508|GO:0008234
Bva07g01898 340 PRINTS Papain cysteine protease (C1) family signature 140 155 IPR000668 GO:0006508|GO:0008234
Bva07g01898 340 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Bva07g01898 340 Pfam Papain family cysteine protease 122 339 IPR000668 GO:0006508|GO:0008234
Bva07g01898 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 299 318 IPR025661 -
Bva07g01898 340 PANTHER PEPTIDASE C1A, CYSTEINE PEPTIDASE, ASPARAGINE ACTIVE SITE PROTEIN-RELATED 20 339 - -
Bva07g01898 340 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 339 - -
Bva07g01898 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Bva07g01898 340 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 140 151 IPR000169 -
Bva07g01898 340 SMART Inhibitor_I29_2 38 95 IPR013201 -
Bva07g01898 340 CDD Peptidase_C1A 123 338 IPR039417 -
Bva07g01898 340 SUPERFAMILY Cysteine proteinases 31 339 IPR038765 -
Bva07g01898 340 Gene3D Cysteine proteinases 17 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01898 Bva-Chr7 16985685 16986815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01898 - - pop:18104511 529.635