Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01897 ATGGCTCTGTTACTCCCTCCTGTGTATATTGAAGCTTTCAAGGCCCAAAATCCATTATTAAACTCGTACTCAAGAAATCAATGGCGGATGCTGGCGAAGACTTCTCCTTGGACGTTTAGTACTCAAAGCGGTAAGCGAAGAGGCTGCTTTAGAGTAAGATTTACTCCTGAGAACTCAACTTCAACAGATGATATTGCAGATGACTATTATGCAGTTCTGGGTCTGGTTCCAGATGCCACACCAGCGCAGATAAAGAAGGCCTACTATGATTGCATGAAAGCTTGCCACCCGGACTTGAGTGGCGATGATCCTGAAATCACCAATTTCTGCATGTTCATCAACGAGGTCTATGAGGTGCTCAGTGATCCGGTGCAGCGCATGGTATATGATGAAATTCATGGATACTCTTTGACTTCAATCAATCCTTTCCTGGATGATTCTAGCCCAAAAGATCATGTTTTCGTTGATGAATTCAGCTGCATAGGCTGCAAAAATTGTGCCAATTTAGCTCCTGATGCCTTTCGAATAGAAGAGGAGTTCGGAAGAGCCAGAGTACATAACCAGTGTGGCGACCCCAAATTAGTTAATCAGGCAGTTGAGAGCTGTCCTGTTGATTGCATTCATTGGACATCTGCTGCACAACTGTCATTACTCGAAGATGAAATGCGCCGAATAGAAAGAGTCAATGTTGCCCTTATGCTTTCAGGAATGGGATCAGCATCGGCTGATGTTTTCAGAATGGCAAGTTCCCGATGGGAGAAGAGACAGGCAAAAGTCTTGcaAAAGgcaaaaatgagaatgatgaAGCCGAAAGGGTCCGATAAAACGGATTCATATTGGGACAACCTATGGGGCAAACCTCGAGAGTACCAAAACTCAGAGGAGGAAGTGAAAGAAAGAGCAAGTAGAGCTGCTGCAGCAGCTCGAAGATGGAGGGAGTATTCAAGGCGGGGCGCCGACAAGCCTCCCACATTTAAACTTCCAGAGGCAGCCTCCTGCGAGGAGAACTA 1010 0.4505 MALLLPPVYIEAFKAQNPLLNSYSRNQWRMLAKTSPWTFSTQSGKRRGCFRVRFTPENSTSTDDIADDYYAVLGLVPDATPAQIKKAYYDCMKACHPDLSGDDPEITNFCMFINEVYEVLSDPVQRMVYDEIHGYSLTSINPFLDDSSPKDHVFVDEFSCIGCKNCANLAPDAFRIEEEFGRARVHNQCGDPKLVNQAVESCPVDCIHWTSAAQLSLLEDEMRRIERVNVALMLSGMGSASADVFRMASSRWEKRQAKVLQKAKMRMMKPKGSDKTDSYWDNLWGKPREYQNSEEEVKERASRAAAAARRWREYSRRGADKPPTFKLPEAASCEEN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01897 336 Gene3D DnaJ domain 53 142 IPR036869 -
Bva07g01897 336 PRINTS 3Fe-4S ferredoxin signature 166 176 IPR001080 GO:0005506|GO:0009055
Bva07g01897 336 PRINTS 3Fe-4S ferredoxin signature 195 207 IPR001080 GO:0005506|GO:0009055
Bva07g01897 336 PRINTS 3Fe-4S ferredoxin signature 155 166 IPR001080 GO:0005506|GO:0009055
Bva07g01897 336 SMART dnaj_3 67 125 IPR001623 -
Bva07g01897 336 SUPERFAMILY 4Fe-4S ferredoxins 152 209 - -
Bva07g01897 336 Gene3D - 151 211 - -
Bva07g01897 336 PRINTS DnaJ domain signature 70 88 IPR001623 -
Bva07g01897 336 PRINTS DnaJ domain signature 88 103 IPR001623 -
Bva07g01897 336 PRINTS DnaJ domain signature 105 125 IPR001623 -
Bva07g01897 336 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Bva07g01897 336 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 333 - -
Bva07g01897 336 CDD DnaJ 68 122 IPR001623 -
Bva07g01897 336 Pfam DnaJ domain 68 130 IPR001623 -
Bva07g01897 336 SUPERFAMILY Chaperone J-domain 68 158 IPR036869 -
Bva07g01897 336 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 151 179 IPR017896 -
Bva07g01897 336 MobiDBLite consensus disorder prediction 311 336 - -
Bva07g01897 336 PANTHER OS01G0730500 PROTEIN 1 333 - -
Bva07g01897 336 Pfam 4Fe-4S single cluster domain of Ferredoxin I 155 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01897 Bva-Chr7 16982040 16984708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01897 - - vra:106778489 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01897 07 16982040 16984708 Bva07g01897 07 16982040 16984708 ECH