Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01887 ATGATTACTACTGGCAAAATTAAATCCGTTGATTTTTACCGGAAAATTCCCAGAGATTTGACCGAGGCATCATTATCAGGAGCAGGATTATCCATAATAGCAGCGCTCTCCATgatgtttttatttggaatGgaattaagtaattatatgTCTGTCAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGCGACTTTCTGCGTATAGATTTCAACATCAGTTTTCCTGCACTCTCATGTGAATTTGCATCAGTTGACGTGAGTGATGTGCTGGGAACAaatAGGCTGAATATAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAAATCTAAGATCAACTGGCTCTGAGTTTCATTCAGGACCAGTTCCAACCTCCATTAAGCATGATgatgaaataaatgaagaatccACTGAAGATTCTGTTTCACTCACGGgacttaattttgataaaatttctcaCCAGTTTCCAATTTtggttgtaaatttttttgctcCTTGGTGCTACTGGAGTCAACGCttgaAACCTTCATGGGAGAAGGCGGCTAAAATGATTAGACAGagatatgatCCAGAAATGGATGGGCGAATTCTTTTGGCTAAAGTTGATTGCACTGAAGAAGTTGACCTTTGTAGGAGGAATCACATACAAGGGTATCCGTCTATTCGCATCTTTCGTAAAGGAAGTGATGTTAGGGAAGACCACGGACACCATGACCATGATTCTTATTATGGAGATCGTGATACAGATAGCCTAGTCAAGTTTATGGAGGATTTAGTGACATCTCTCCCAACAGTATCTCGAAAACTAGCTTTAGGGGATAAATCTAATGGAACAGAAAGTGCAAAAAGACCAGCACCAACCTCAAGTGGATGTAGAATTGAAGGTTATGTGCGTGTCAAGAAGGTTCCTGGAAACTTAATCATTTCAGCTCTATCTGATGCTCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATCTCCAATTTGTCCTTTGGAAGGAAAATCTCACCTAGGGTCATGAGTGATGTCAAACGTTTGATACCTTATCTTGGTAGCAGCCATGATAGGTTAAATGGTCGGTCATTCATCAATGATCGTGATTTAGGAGCAAATGTTACTATAGAACATTATCTTCAGATAGTTAAAACAGAGGTGATAACTAGGAAAGACTACAAATTAGTTGAGGAGTACGAGTACACAGCACACAGCAGTCTTGCACAGAGCCTACACATTCCTGTGGCGAAGTTCCATCTCGAGCTGTCTCCCATGCAGGTCTTAATAACAGAAAACCAGAAGTCTTTTTCACATTTCATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTGCTGGAATTCTTGACTCAATTTTGCACAACACTGTTAGAATGATGAGAAAAGTTGAGCTCGGGAAAAATTTTTG 1442 0.3752 MITTGKIKSVDFYRKIPRDLTEASLSGAGLSIIAALSMMFLFGMELSNYMSVSTSTSVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRSTGSEFHSGPVPTSIKHDDEINEESTEDSVSLTGLNFDKISHQFPILVVNFFAPWCYWSQRLKPSWEKAAKMIRQRYDPEMDGRILLAKVDCTEEVDLCRRNHIQGYPSIRIFRKGSDVREDHGHHDHDSYYGDRDTDSLVKFMEDLVTSLPTVSRKLALGDKSNGTESAKRPAPTSSGCRIEGYVRVKKVPGNLIISALSDAHSFDASQMNMSHVISNLSFGRKISPRVMSDVKRLIPYLGSSHDRLNGRSFINDRDLGANVTIEHYLQIVKTEVITRKDYKLVEEYEYTAHSSLAQSLHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGILDSILHNTVRMMRKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01887 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Bva07g01887 480 Gene3D Glutaredoxin 129 285 - -
Bva07g01887 480 SUPERFAMILY Thioredoxin-like 137 261 IPR036249 -
Bva07g01887 480 ProSiteProfiles Thioredoxin domain profile. 98 263 IPR013766 -
Bva07g01887 480 Pfam Thioredoxin 145 243 IPR013766 -
Bva07g01887 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Bva07g01887 480 Pfam Endoplasmic reticulum vesicle transporter 288 461 IPR012936 -
Bva07g01887 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Bva07g01887 480 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01887 Bva-Chr7 16920470 16927841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01887 - - gmx:100787595 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01887 07 16920470 16927841 Bva07g01887 07 16920470 16927841 ECH