Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01885 ATGATGTGGAGTAGTGGAGTTCCTGCTGATTCTTTCTATGAAACCCGGTCTGAGTGCACCGATTGCCCCAAGAGTCGTTTTAGAATCagaGCTGGTAAGACACTaagtgaaagaaaatggaagtcTACATTTAGTCCAGAAGGACACCTGGATATAAGCAAGAGTTTGGGCCGAATCCATCGAGGGGGAATCCATCCATCAATTagaggagaagtttgggaattTCTACTTGGTTGCTATGACCCAGAGAGTACATATGAGGAAAGAGAACAGATAAGAGAGCACCGAAGGTTGCAATATGCTAAATGGAAGGAAGAATGCACCCAACTGTTTCCTCTTGTTGGAAGCGGTAGATTTATTACAGCACCTGTAATCACTGAAGAGGGACAGCCAATTCAAGATCCCTTGGTGCTTTTACAAATGAATACAGACAAGGGAGCGGTTGTACCTCCTCAAGAAAATAATGGGGATAGTGCACCCACTGCGACTAATTTAGAAAGGGTGACACACAATAGAATAATTCAGTGGATGCTAACACTACATCAAATAgGTCTTGATGTGATTCGCACTGATAGGACACTGGTCTTTTATGAGAAGCAAGAGAACTTGTCAAAACTATGGGATATTCTTGCTGTTTATGCTTGGGTAGATAGAGATGTTGGCTATGGTCAAGGAATGAGTGACCTATGCTCCCCAATGATAATGCTTCTTGAGGATGAAGCAGATGCGTTTTGGTGCTTTGAACGTTTGATGCGCAGATTGCGTGGGAATTTCAGATGCACTGATAGTTCTGTTGGGGTGGAGTCGCAACTGACTAATTTGGCTACGGTTACTCAAGTCATTGATCCAAAACTTCATCAACATATAGAGAATCTAGGTGGAGGTGACTATCTCTTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAGTTCTCCTTCTGTGATTCATTGTACCTTTGGGAGATGATGTGGGCTCTAGAATACGATCCTGATTTGTTCTTAATGTATGAAGAGCATGAAGCGGATTCTGAAAATGCTGATGGCTCTaaaggaaaaccaaaatcaaCACGTCAATGTGGCAAGtatgaaagagaaaacttGAGATGTGGAGGTGAAGCTCCTCTTCCCATATCAGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAATAGCGCAAAACTATTGGCAGAAGCCCGGGGCCTTGATGATGTTGTCAAGATATTGAATGACAATGCGGGAAATCTGGATGCCAAAAAAGCTTGTGCTGGGGCAATGAAACTACACAAGAAATACTTGAAAAAGGTCGCGATGACGAAGAAGCCAGCATA 1328 0.4074 MMWSSGVPADSFYETRSECTDCPKSRFRIRAGKTLSERKWKSTFSPEGHLDISKSLGRIHRGGIHPSIRGEVWEFLLGCYDPESTYEEREQIREHRRLQYAKWKEECTQLFPLVGSGRFITAPVITEEGQPIQDPLVLLQMNTDKGAVVPPQENNGDSAPTATNLERVTHNRIIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYGQGMSDLCSPMIMLLEDEADAFWCFERLMRRLRGNFRCTDSSVGVESQLTNLATVTQVIDPKLHQHIENLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEHEADSENADGSKGKPKSTRQCGKYERENLRCGGEAPLPISVFLVASVLKDNSAKLLAEARGLDDVVKILNDNAGNLDAKKACAGAMKLHKKYLKKVAMTKKPA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01885 442 ProSiteProfiles TBC/rab GAP domain profile. 63 328 IPR000195 -
Bva07g01885 442 PANTHER - 2 436 - -
Bva07g01885 442 SMART tbc_4 60 351 IPR000195 -
Bva07g01885 442 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 436 - -
Bva07g01885 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 266 431 IPR035969 -
Bva07g01885 442 Pfam Rab-GTPase-TBC domain 170 326 IPR000195 -
Bva07g01885 442 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 162 258 - -
Bva07g01885 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 288 IPR035969 -
Bva07g01885 442 Gene3D - 264 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01885 Bva-Chr7 16912421 16917528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01885 - - csv:101211793 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01885 07 16912421 16917528 Bva07g01885 07 16912421 16917528 ECH