Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01875 ATGCGCTCCTCAAAAGCTAATATTGTAAGCAACCTATTCAGAATAGCCAACAAAGCCAAGGCTAAAGCCAACAAGTTCAAATCGCCAAAAATCCTATCCCGTTCAGAAGAGTATCGCCAGAAAGTGAAAGATGAAATAGCGCTCGCAGCACTGAAACTTGACGCTGATACAGAGGATGTGCCGGTGCCTGGAGAGGTTTCAACCATATTGCACGATGATATCTGTGTCAAGCAACCCGATCCCATAGAAATTGAGGATGTGGAAAACTTGGAAAGAGCACTACACATACCATGGCTTTCAAGCACAATAGATGGTCATATACCACTAGGAAGAAAAGAGGTATCTCGTGAAAGGAAACAGAAGTGGATTTTTAAATCCTCACAGGGTAACCGTTTCTCCAGGTTAGTTAAAATGTGTGCAAATAGACTGGGAACAGAAACTACCCTTCAGGTGTTCGGTAGATTGGGACGAGAAACGGGTGTGAAAGAATACAATGCATTGATAGGAATATGCGTATCTAAGGCTAGGGCAACTGATGATGAGGAAGTTTCAATAGAACAAGTCAGCCAGGCTTTTCATCTTTTCAAATCAATGAGAGAACAAGGTTTTGAGCTAGCAGAGGAATCATATAGCCCAGTTCTTAtgtatttaattgatatgGGTATGGTTGAAGAATTTCACTTCTTCTATGAAGTTATCAAAGATCAGAATCCCAGTTCAATTTCAAGATTGGGTTACTACGAAATGATGCTGTGGTTAGCAGTtcatgatgaagaaaagattaaagaaCTTTGTGAATATATTGCAGTTAATGAAGGTGAAGGCACTTCTGATTTACAAGAAAACTATTTGTTGGCTCTTTGTGAAAGTGATCGGAAGGAGGAGTTGTTGCAGCTGTTGGAAATTATAGACATAACAAAGCTATCATCTGGAAAATATATAGCAAATATATTTCAAGCACTTGGAAGGCTAATGCTTGAAACTTTAGCAAAGAAGTTTCTTTTGGCTTTCAAAACGTGTGATGATGAAGCAgataatatttcaaacttaattGCAATTTATGCTGTCAGCATTCCAAATTTAGTGGTTGAGGATGTCATCTCAAAATTCAGGGATTTGCATCAAAAACTGGATGTTTCGCCTTCATCCTCATCGTTTGAGAAGCTCATTTTACATAGCTGTGACTTACACAAGGTGCATGATGCTTTAGATATTGTTGATGAAATGTGTAAAGAAGGCTTTCCCTTATCTACCGAGGTGTTACATACAATATTACGAGTCTGTGAGGAAACCTGTGATTATAATTTGGTCCATCGGATCTATTCCATAATATGTCACTACAATTTGAACTCGAATGGTGAAACATTCGGGTGGATGATAAACTTGTACGTGAAGATGAAAGATTTTGAAGGTGCATATAAGATGCTTGATAATTTGGAGGAAAGGCAGTTGGCCCCTACCTCGGGCATGTACAATTACATAATGGCAGGATTTTTTCGAGAGAAAAACATTCCTGGTGGGTTGAGGGTCCTTAAGCAGATGGAACGTGCTGGTGTAAAACCTGATTCACAGACTTTCAGCTATTTGATTAGCAACTCTGAAACTGAAGAGAACATAGTCAAGTATTACAAAGAACTGAAGCAATCTGGAGTCCATGCcacaaaacaaatttacatTGCCCTTATCAATGCTTATGCATCTTGCGAACAGCTGGAGAAGGCAAAACAGGTAGTCTTGGATCCTGGCATACCGGTTAAGAACTTAATTGAAATCAAGAGTGCTCTTGTCTCAGCCCTTGCATCACATGGGCAATTGTCTGAGGCTTTTCATATTTATGAGGAAATCAAGCAAGCTGGACACAATCTGGAGCCAAAAGCTGTTACGACCCTCATTGAGTACACTCAATCTGATGGAGAGTTGGATAGATTGCTTCAGCTACTCAAAGAATTGACTGACCCAGACTATTGGTTTGACGGATGTGTCAGAGTTATCTTGTATTGTATTCGAAACAAGAATTTAAGTTCTGCTGTTGATTTATTCAAGCAACTCAGGGATAAGTTCCAAAACGATGAGCTATTTATGGAAGCTATATTTGATGAGGTATTTGCTCTAATTGCGACATCAGAATCCGCATATCTGCAGATTGGCCTGGACTTGCTTTGGGTGATCAAGGATGAGCTCGGCCTTTCACCCTCACGGAAATGCCTTGATTTCCTTCTAAGTGCTTGTGCTAATGCCAGAGATTTGCATAATGCTCGTTTGGTTTGGAAAGAATATAAAGCTGCTGGACTTCCTTACAATGTTCTAAGTTGCTTGAGGATGTATCGGGCGCTTTTGGCATCAGGAGAGCCAAAATCTGCAAATGCTATGCTTCAGAGAATTCCAAAAGAGGATAGCCACGTTCGCCAAGTCATAGATGCATTACAGCATGCTTACGCTGATCATGTCCCTAAAAAacctaagaaaaagaagggattgaaaaaaaaaaaaacatg 2495 0.3864 MRSSKANIVSNLFRIANKAKAKANKFKSPKILSRSEEYRQKVKDEIALAALKLDADTEDVPVPGEVSTILHDDICVKQPDPIEIEDVENLERALHIPWLSSTIDGHIPLGRKEVSRERKQKWIFKSSQGNRFSRLVKMCANRLGTETTLQVFGRLGRETGVKEYNALIGICVSKARATDDEEVSIEQVSQAFHLFKSMREQGFELAEESYSPVLMYLIDMGMVEEFHFFYEVIKDQNPSSISRLGYYEMMLWLAVHDEEKIKELCEYIAVNEGEGTSDLQENYLLALCESDRKEELLQLLEIIDITKLSSGKYIANIFQALGRLMLETLAKKFLLAFKTCDDEADNISNLIAIYAVSIPNLVVEDVISKFRDLHQKLDVSPSSSSFEKLILHSCDLHKVHDALDIVDEMCKEGFPLSTEVLHTILRVCEETCDYNLVHRIYSIICHYNLNSNGETFGWMINLYVKMKDFEGAYKMLDNLEERQLAPTSGMYNYIMAGFFREKNIPGGLRVLKQMERAGVKPDSQTFSYLISNSETEENIVKYYKELKQSGVHATKQIYIALINAYASCEQLEKAKQVVLDPGIPVKNLIEIKSALVSALASHGQLSEAFHIYEEIKQAGHNLEPKAVTTLIEYTQSDGELDRLLQLLKELTDPDYWFDGCVRVILYCIRNKNLSSAVDLFKQLRDKFQNDELFMEAIFDEVFALIATSESAYLQIGLDLLWVIKDELGLSPSRKCLDFLLSACANARDLHNARLVWKEYKAAGLPYNVLSCLRMYRALLASGEPKSANAMLQRIPKEDSHVRQVIDALQHAYADHVPKKPKKKKGLKKKKT 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01875 831 TIGRFAM PPR: pentatricopeptide repeat domain 490 523 IPR002885 -
Bva07g01875 831 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 487 521 IPR002885 -
Bva07g01875 831 Gene3D Tetratricopeptide repeat domain 536 658 IPR011990 GO:0005515
Bva07g01875 831 Gene3D Tetratricopeptide repeat domain 382 535 IPR011990 GO:0005515
Bva07g01875 831 Gene3D Tetratricopeptide repeat domain 660 830 IPR011990 GO:0005515
Bva07g01875 831 Gene3D Tetratricopeptide repeat domain 127 323 IPR011990 GO:0005515
Bva07g01875 831 PANTHER OS02G0132600 PROTEIN 4 827 - -
Bva07g01875 831 Pfam Pentacotripeptide-repeat region of PRORP 392 548 IPR033443 -
Bva07g01875 831 Pfam PPR repeat 558 577 IPR002885 -
Bva07g01875 831 Pfam PPR repeat 593 619 IPR002885 -
Bva07g01875 831 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 452 486 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01875 Bva-Chr7 16859576 16869196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01875 380 768 Glycosyltransferase AT1G05670 18.900 1.05e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01875 - - qsu:111989416 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01875 07 16859576 16869196 Bva07g01875 07 16859576 16869196 ECH