Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01873 ATGGCCAAGTATGAGCCCAAGTATGCTTTGGGGTGTGAACCAGTGGTAGGTTCCTTAACATCGTCAAAGAAGAACGAGTACAAGGTTACCAATCGCCTTCAAGAGGGCAAGCGCCCAATTTACGCTATTTTGTTCAACTTCATTGACTCCAATTACTTCAACGTTTTCGCCACCGCCGGTGGCAACCGGgTGACTGTTTATCAATGCCTTGAAGGAGGAATTATAGCTCTATTGCAATCTTACGTAGATGAAGATGTAAGTGAAGATTCTAAGGATGAATCCTTTTACACGGTGAGCTGGGCATCCGACACTGATGGGACCCCACTTGTTGTGGCTGGAGGACTCAATGGTATAATCCGAATCATGGATATTGGTAGAGAGAAGATACATAAGAGTTTTATTGGCCATGGGGACTCTATAAATGAAGTCAGGACTCAACCTCTGAAGCCATCACTTATAGTGTCTGCAAGCAAAGACGAGTCTGTCCGGTTATGGAATGTTCATACGGGAATATGCATTTTGATATTTGCTGGAGCTGGGGGTCACCGTAATGAAGTTTTGAGTGTGGACTTTCATCCATCAGATATGTATCGAATTGCCAGTTGTGGGATGGATAATACTGTCAAGATATGGTCTATGAAGGAATTCTGGCCCTACGTAGAGAAATCATTCACATGGACAGATCTTCCTTCTAAGTTTCCAACAAAATATGTGCAATTTCCTGTGTTCATTGCTTCGGTTCATACAAATTATGTTGACTGTAACAGGTGGCTTGGTGATTTTATCCTATCTAAGAGTGTTGACAATGAAATTGTGTTGTGGGAACCTAAAATGAAGGAACAAACCCCAGGGGAGgGGACAGCTGACATTCTTCAGAAATACCCTGCCCCTGAGTGCGATATCTGGTTCATCAAGTTTTCTTGTGATTTCTGTTACAATTCAATTGCAATAGGGAACAGGGAAGGTAAGATATTCGTTTGGGAAGCGCAGTCTAGTCCTCCTGCTCTTATTGCAAGGTTGTCCCATGCTCAATCAAAAGCAGTAATCAGACAGACTGCTTTATCCTTCGATGGAAGCACTATTTTGTGTGGCTGTGAGGACGGGACAATATGGCGCTGGGATGCTGATACAACTTCCTG 1139 0.4328 MAKYEPKYALGCEPVVGSLTSSKKNEYKVTNRLQEGKRPIYAILFNFIDSNYFNVFATAGGNRVTVYQCLEGGIIALLQSYVDEDVSEDSKDESFYTVSWASDTDGTPLVVAGGLNGIIRIMDIGREKIHKSFIGHGDSINEVRTQPLKPSLIVSASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDMYRIASCGMDNTVKIWSMKEFWPYVEKSFTWTDLPSKFPTKYVQFPVFIASVHTNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQTPGEGTADILQKYPAPECDIWFIKFSCDFCYNSIAIGNREGKIFVWEAQSSPPALIARLSHAQSKAVIRQTALSFDGSTILCGCEDGTIWRWDADTTS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01873 379 Gene3D - 20 375 IPR015943 GO:0005515
Bva07g01873 379 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Bva07g01873 379 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 170 - -
Bva07g01873 379 PANTHER BNAA05G20190D PROTEIN 7 377 - -
Bva07g01873 379 Pfam WD domain, G-beta repeat 131 166 IPR001680 GO:0005515
Bva07g01873 379 Pfam WD domain, G-beta repeat 180 212 IPR001680 GO:0005515
Bva07g01873 379 PRINTS G protein beta WD-40 repeat signature 153 167 IPR020472 -
Bva07g01873 379 PRINTS G protein beta WD-40 repeat signature 361 375 IPR020472 -
Bva07g01873 379 PRINTS G protein beta WD-40 repeat signature 199 213 IPR020472 -
Bva07g01873 379 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 179 214 - -
Bva07g01873 379 SUPERFAMILY WD40 repeat-like 26 376 IPR036322 GO:0005515
Bva07g01873 379 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Bva07g01873 379 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 214 IPR001680 GO:0005515
Bva07g01873 379 PANTHER POLYCOMB PROTEIN 7 377 - -
Bva07g01873 379 SMART WD40_4 80 123 IPR001680 GO:0005515
Bva07g01873 379 SMART WD40_4 126 166 IPR001680 GO:0005515
Bva07g01873 379 SMART WD40_4 287 328 IPR001680 GO:0005515
Bva07g01873 379 SMART WD40_4 333 374 IPR001680 GO:0005515
Bva07g01873 379 SMART WD40_4 238 275 IPR001680 GO:0005515
Bva07g01873 379 SMART WD40_4 169 212 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01873 Bva-Chr7 16853962 16857507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01873 109 374 Miscellaneous Gene Families AT5G08390 21.852 2.94e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01873 K11462 - jre:108983540 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01873 07 16853962 16857507 Bva07g01873 07 16853962 16857507 ECH