Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01871 ATGATTAAGAGTGAATTTGAAGAATCGGTGATCGTTCTACTCTGGGTAGCTGCTATTTTCGTCTCTTTGATTCTGGGGATGAGGAATGATAGCCAGAAACAGCAGCAGGGAGGCGCTCCTCGCTCTGGGCGAACTAACGGGTTTATTCCCAGCTCATTTCGTGCCATCTCGAGCTACCTGAGGATCGTTTCATCTGGTGCTTCCACCGTCGCTCGCTCTGCAGCATCAGTTGCGTCCTCGATTGTAGATAGGGATGATGACGCTGACCATGATCAGGTGATCTGGGCTGGGTTTGACAAGTTAGATGGTGATGGAGAAGTCATTCGGAAAGTTCTTCTCCTGGGCTATCGGTCTGGCTTCCGGGTTTGGGATGTTGAAGACTCAAATAATGTACGTGACTTAGTTTCACAACATGACGGTCCTGTTTCTTTCATGCAAGTGCTACCAAAACCAATTGCATCAAAGAGAGCTGGAGATAAGTTTGCTGACAGCCGCCCGCTATTAGTAGTTTGTACTGATGGTTTCTTTGCTGGAGGCAATAACATTCGGGATGGGTTGTCTGCCCCTTGCAATGGCAGCACTTCAAACGGCCTTGACCAAGTGAATGGCAATTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAAATCTCAGTCATATGTTCATGTACTAAAGTTCAGGTCTGTTATTTATTCTGTAAGGTGCAGTTGTCGAGTAGTTGCTGTTTCTCAATCAACTCAGATACATTGTTTTGATGCCACAACATTAGAAAGGGAATATACTTTACTCACCAATCCTGTAGTAACGGGTTGCCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCAGTGGGTCCTAGATGGCTGGCTTATAGTGGAAGCCCAGTTGTTGTCTCCAATCCTGGGCGTGTCACTCCACAACATTTGATGCCCTCTGCAAGCTTTCCtggtttttcttcaaatgGGAGCTTGGTTGCACACTTTGCCAAAGAATCCAGCAAGCAACTTGCTGCTGGGATTGTCACCCTTGGAGATATGGGCTATAAAAAGCTTTCCAGATATTGCTCTGAACTTCAACCTGATAGCAATAGTTCTTCACAATCTGTAAATTCTGGCTGGAAGGGCAGTGGAAGCATCAATGGCCATTCAGCAGATGTGGATAACGCTGGAATGGTCATAGTCAGAGATATTGTCAGTAAGGATGTTGTTGCTCAATTCCACGCCCACAAAAGTCCTATTTCAGCATTGTGCTTTGATCCTAGTGGTACCATATTAGTGACTGCTTCAGTTCAGGGGCATAATATAAATGTTTTCAAGATAATGCCTGGACAAACAGAGGGTTCGTCTAAAGCTGATGCTGGTCCTTCCTATGTTCATCTTTACAGGCTGCAGCGTGGACTTACAAATGCAGTCATACAGGATATTAGTTTTAGTGATGACAGCAACTGGATTATGATTAGTTCCTCAAGGGGCACCAGCCATCTATTTGCCATAAATCCTCAGGGGGGATCTGTAAATATTCTGTCCTCTGATGCTAGTTTTACTGCAAAAAGTAGTGGCTTGGGTATTAAGTCTAATCAAGGAATTCGCTGGCCTCCTAGTTCAAGTGTACAAATGCCTAATCAGCAGAGCTTGTGTGCAGCTGGCCCTCCAATCACACTTTCTGTTGTAAGCAGAATTAGAAATGGAAATAACGGCTGGAGAGGTACTGTAAGTGGTGCTGCAGCAGCTGCGACTGGTAGAATGAATTCCTTCGCTGGGGCTATTGCTTCGTCATTCCATAACTGCAAAGGCAGTAACTTATACATTGATGGGAACTATTCCAAGACAAAGTATCACCTGTTGGTTTTCTCACCCACTGGTTCCATGATACAATATGCTTTGCGGGCATCAACTGATCAAGATCCGGTAATTGTTACTGGATCAAATCCTGCTTATGATACAATTCTAGAGGCTGATGCAAGATTAGTAGTTGAGGCTATTCAGAAATGGAATATATGTCAGAAACATAATAGAAGAGAGCGAGAAGATAATATTGACATATATGGTGAGAATGGAATTTCAGACAGCAATAAAGTATATCCTGAAAAAGTGGAGGAGAATGTTGTCAGCCCAAAATTCAAGAATGCTGTTCCAAAAGCAAATTCCTGTCCAGAGGAAGAgcatcatttttatatttcagaaGCTGAACTGCAGATGCATCAAGCTCGGACTCCACTCTGGGCAAAACCTGAGATATACTTCCAGTCAATGGTGAAAGACACTACTGTAATGGAGGAAAAAACTGCTTCTGGAGGGGAAATTGAGATTGAAAAAATTCCAACTCGAATGATTGAAGCTAGGTCAAAAAATTTGATTCCAATTTTTGACTATATTCAGACTCCAAAATTCCAGCAAACAAGGGCTCCTCCTCTCGACAGCAAGATAAACGAGCAACTGTTGCGTAAGAGCTCTGGGATATCTGAAAATGGCAGGATTTCACTGAGGAGTGTTTTAGATTCTCCTGATTATATGATAAATTCTGGTGCTGCTATAACTGAATTTAACAATGGCATCGAAGGATCCGAGTGGGATGATCACCTGATGCCAGCAGAAAGAAAGggttttgtaaataaaaatggcAACCTTAAACCAAATACTGGACTTGAGattgtaaataataaagagCACTCAAACATGGAGGCTCAACTCAAGTATGTAAATAGTCACAAAGGAAGCCTGAAAATGGAGAATCACTCGGAAGGCAAAGGCAATGAATTTGATTA 2765 0.4221 MIKSEFEESVIVLLWVAAIFVSLILGMRNDSQKQQQGGAPRSGRTNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVDRDDDADHDQVIWAGFDKLDGDGEVIRKVLLLGYRSGFRVWDVEDSNNVRDLVSQHDGPVSFMQVLPKPIASKRAGDKFADSRPLLVVCTDGFFAGGNNIRDGLSAPCNGSTSNGLDQVNGNYLPTTVQFYSLKSQSYVHVLKFRSVIYSVRCSCRVVAVSQSTQIHCFDATTLEREYTLLTNPVVTGCPGSGGVGYGPLAVGPRWLAYSGSPVVVSNPGRVTPQHLMPSASFPGFSSNGSLVAHFAKESSKQLAAGIVTLGDMGYKKLSRYCSELQPDSNSSSQSVNSGWKGSGSINGHSADVDNAGMVIVRDIVSKDVVAQFHAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGQTEGSSKADAGPSYVHLYRLQRGLTNAVIQDISFSDDSNWIMISSSRGTSHLFAINPQGGSVNILSSDASFTAKSSGLGIKSNQGIRWPPSSSVQMPNQQSLCAAGPPITLSVVSRIRNGNNGWRGTVSGAAAAATGRMNSFAGAIASSFHNCKGSNLYIDGNYSKTKYHLLVFSPTGSMIQYALRASTDQDPVIVTGSNPAYDTILEADARLVVEAIQKWNICQKHNRREREDNIDIYGENGISDSNKVYPEKVEENVVSPKFKNAVPKANSCPEEEHHFYISEAELQMHQARTPLWAKPEIYFQSMVKDTTVMEEKTASGGEIEIEKIPTRMIEARSKNLIPIFDYIQTPKFQQTRAPPLDSKINEQLLRKSSGISENGRISLRSVLDSPDYMINSGAAITEFNNGIEGSEWDDHLMPAERKGFVNKNGNLKPNTGLEIVNNKEHSNMEAQLKYVNSHKGSLKMENHSEGKGNEFD 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01871 921 Pfam Breast carcinoma amplified sequence 3 549 787 IPR022175 -
Bva07g01871 921 SMART WD40_4 399 439 IPR001680 GO:0005515
Bva07g01871 921 SMART WD40_4 456 497 IPR001680 GO:0005515
Bva07g01871 921 SMART WD40_4 217 252 IPR001680 GO:0005515
Bva07g01871 921 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 27 889 IPR045142 GO:0006914
Bva07g01871 921 Gene3D - 102 535 IPR015943 GO:0005515
Bva07g01871 921 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 27 889 - -
Bva07g01871 921 SUPERFAMILY WD40 repeat-like 110 499 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01871 Bva-Chr7 16834478 16840855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01871 - - qlo:115955563 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00755 09 3853198 3859205 Bva07g01871 07 16834478 16840855 BWGD
Bva07g01871 07 16834478 16840855 Bva07g01871 07 16834478 16840855 ECH