Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01856 ATGTCTCTTCCAGCTTCAATGCTCCGCTCTAACGCAACACCTGCTGCCATACCTCGACGTTCTGCAAATTATCATCCTTGTATTTGGGGGGATCGCTTCCTTCAATATGCTTATCAGTCTATGGAAGCCGACGATGCAATGAAAGAGCAAATTACAGTactgaaagaaaaagtgaggaaGATGCTTCTGCCAGAAACTGATAAGCCCTTGTCGAAACTTAACTTGATTGACTCAATCCAACGTTTGGGTGTGTGCTACCATTTTGAACGGGAGATTGATCAAGTGCTGCAAGAGATTCACAAGAACTTTGTTTATGATGGAAAAATAACTCTCGATGAAGACattcattctctttctcttttctttcggTTACTGAGACAACAAGGGTATCGCATTTCACCTGATGTGTTTCACAAGTTCAAGGATGTGGACGGAAGTTTTAGTGAAAGGCTTACCATGGATGTTGAAGGGATGTTAAGTTTGTATGAAGCTGCTCATCTCAGGATTCATGGAGAGGAAATATTAGATGAAGCTCTTGCTTTCACTTCTACTCAACTTGAGCGCATGAAACACCAATTGAGTCCTTCTCTAGTTTCAAAAGTCAATCATAGTTTGAGGTATCCTCTTCGTAAGAGCCTGCCTAGGCTAGAGGCACGACATTACTTTTCAACTTACCAAGAAGATCCTGGCCATGATGAAACTCTACTGGCTTTGGCAAAGTTAGACTTCAACATGGTTCAAAAACTACATCAAAAGGAACTTGCAGATGTTTCTTTatggTGGAAAGATTTGGATTTTGCAACAAAGCTGCCCTTTGCGCAAGAGTTGCAACTTTATACCGAAGCAATTGAGAGGTGGGATATCAGCTGCATGGATGTTCTCCCAGATTACATGAAAGTTCCCTATCAAGCACTCTTGGATATCTATGAAGAAATGGAGCAAGAGATGACAAAGGAAGGAAGAGCATTTTGTGTTAGCTACGCAAAAGATGAAATGAAAAGATTGACCCGAGCTTACCTTGCCGAGGCCAAATGGCTCATGGACGATATAGTTTCAAACGAACGAGAGCAAGCAACAGGACATGTTGTCTCAGGACTGGAATGCTACATGAACCAATATGGTGCCTCAAAACAAGACACCATTGATGAATTTAATAGACAAGTTGAAGATGCATGGAAGGATATTAACGAGGCATATCTTGACCCAACTCAAGTGCCTAAGCCTCTTTTATTACGAATTCTTAATTTGACACGTGTAATACACGAGCTTTACAAGGATGAAGACGGCTACACTGTCTCCCGAGGGAAAACAAAGACACTCATTGAGGAATTGCTGTTGAATCCAATGCCACTCTG 1355 0.4022 MSLPASMLRSNATPAAIPRRSANYHPCIWGDRFLQYAYQSMEADDAMKEQITVLKEKVRKMLLPETDKPLSKLNLIDSIQRLGVCYHFEREIDQVLQEIHKNFVYDGKITLDEDIHSLSLFFRLLRQQGYRISPDVFHKFKDVDGSFSERLTMDVEGMLSLYEAAHLRIHGEEILDEALAFTSTQLERMKHQLSPSLVSKVNHSLRYPLRKSLPRLEARHYFSTYQEDPGHDETLLALAKLDFNMVQKLHQKELADVSLWWKDLDFATKLPFAQELQLYTEAIERWDISCMDVLPDYMKVPYQALLDIYEEMEQEMTKEGRAFCVSYAKDEMKRLTRAYLAEAKWLMDDIVSNEREQATGHVVSGLECYMNQYGASKQDTIDEFNRQVEDAWKDINEAYLDPTQVPKPLLLRILNLTRVIHELYKDEDGYTVSRGKTKTLIEELLLNPMPL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01856 451 PANTHER TERPENE SYNTHASE 2-RELATED 274 346 - -
Bva07g01856 451 PANTHER TERPENE SYNTHASE 2-RELATED 346 433 - -
Bva07g01856 451 Gene3D Farnesyl Diphosphate Synthase 346 449 IPR008949 -
Bva07g01856 451 Gene3D Farnesyl Diphosphate Synthase 26 274 IPR008949 -
Bva07g01856 451 Pfam Terpene synthase family, metal binding domain 346 394 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bva07g01856 451 Pfam Terpene synthase family, metal binding domain 274 345 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bva07g01856 451 SUPERFAMILY Terpenoid synthases 231 449 IPR008949 -
Bva07g01856 451 Pfam Terpene synthase, N-terminal domain 28 205 IPR001906 GO:0010333|GO:0016829
Bva07g01856 451 Gene3D - 67 231 IPR036965 GO:0010333|GO:0016829
Bva07g01856 451 PANTHER OS04G0344100 PROTEIN-RELATED 274 346 - -
Bva07g01856 451 PANTHER OS04G0344100 PROTEIN-RELATED 17 274 - -
Bva07g01856 451 PANTHER OS04G0344100 PROTEIN-RELATED 346 433 - -
Bva07g01856 451 CDD Terpene_cyclase_plant_C1 19 448 IPR044814 GO:0010333|GO:0016102
Bva07g01856 451 PANTHER TERPENE SYNTHASE 2-RELATED 17 274 - -
Bva07g01856 451 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 25 231 IPR008930 -
Bva07g01856 451 Gene3D Farnesyl Diphosphate Synthase 275 345 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01856 Bva-Chr7 16766074 16771795 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01856 K15803 K14183 vvi:100257265 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01856 07 16766074 16771795 Bva07g01856 07 16766074 16771795 ECH