Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01852 ATGAGGATTAGTATTGCTCTCTTCCTCTTAAGCCAACTCTTGGCGAGGGCAGAATCAATATGCAGAGCTGATTTTCCACGAGGGTTCATCTTTGGAACTGCTTCTTCAGCTTACCAGTTCGAGGGAGCTGTTGATGAAGGAAACAAAGGAGAAAGTATATGGGATACCTTCTCGCGGATACCAGGCAGAATTTTGGACTTTAGTAATGCAGACACGGCTGTTGATCAATATCATCGGTTTAAGAATGATATAGAGTTGATGAAGGACTTGGGGATGGATGCTTACAGATTTTCCATATCATGGTCAAGAATTTTTCCAACAGATGGAACGGGGGAGCCCAATCCAGAGGGATTAAATTACTACAACTGCCTCATAAATGCTCTACTGGATAAAGGAATCCAGCCTTTTGTAACCCTGTATCATTGGGATCTTCCACAGATGCTTGAAGATAAATACGAAGGATGGTTAAGCCCAGAAATAATACAAGATTTTGAACATTATGCCTATACTTGCTTCAAAGCTTTCGGAGACAGAGTGAAGCATTGGATTACCTTCAATGAACCTCATAACTTTGCTCTCCATGGCTACGATTTAGGCATTCAAGCTCCTGGAAGATGTTCCATTTTGGGTCATTTCCTGTGCAAGAAGGGAAAATCATCTACTGAACCATACATTGTTGCTCACAACATTCTCTTGTCTCACGCTGCTGCTTATCGCAGTTATCAGCAGCATTTCAAGGAAAGGCAAGGAGGTCAAATTGGAATAGCACTAGATGCTGTGTGGTATGAGCCCATAACTGATCTCGATGAGGACAAAGATGCTGCAGCAAGAGCTATGGATTTTTCAGTCGGATGGTTCCTTGATCCTATTTTAACTGGCAAATATCCTGCTTCAATGAAAGAGCTAGTGGCTGAGAGACTACCAGAGATTTCTGATGCAGTTAGGAGTTCTCTGGTGGGATCCCTGGATTTTGTTGGCCTGAATCACTATACCTCAGTGTATACTCGAAACGACAGGACACGGATCAGGAAACTGATTTTTCATGATGCTGCATCTGATGCTGCTGTCATTACAACTTCATCCAGAGGAGGAGCTGCAATCGGAGAAAGGGCAGCTTCACGGTGGCTCAACATTGTTCCATGGGGAATCAGAAAGTTGGCAAGATATGTGAAAGACAAATATGGCAATCCACCAGTGATAATCACAGAAAATGGAATGGATGACCCAAACAAACGTTTTATGACCTTAGAAGAAGCCTTGCAAGATGACAAGAGGATAAGATTCCACAGGGACTATCTCTCAAATCTATCTGCTGCTATAAGGCAAGATGATTGCAATGTCCGAGGTTACTTTGTGTGGTCATTGCTCGACAACTGGGAGTGGAACATGGGCTATACTGTCCGCTTTGGACTCTACTATGTGGATTACAAGAGTAACCTTACTAGGATACCAAAAGCTTCAGTCCAATGGTTCAAAGGCATGCTCAGATTAAAAACTGAAACCAACAATTTGATCTA 1517 0.4265 MRISIALFLLSQLLARAESICRADFPRGFIFGTASSAYQFEGAVDEGNKGESIWDTFSRIPGRILDFSNADTAVDQYHRFKNDIELMKDLGMDAYRFSISWSRIFPNGTGEPNPEGLNYYNCLINALLDKGIQPFVTLYHWDLPQMLEDKYEGWLSPEIIQDFEHYAYTCFKAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSILGHFLCKKGKSSTEPYIVAHNILLSHAAAYRSYQQHFKERQGGQIGIALDAVWYEPITDLDEDKDAAARAMDFSVGWFLDPILTGKYPASMKELVAERLPEISDAVRSSLVGSLDFVGLNHYTSVYTRNDRTRIRKLIFHDAASDAAVITTSSRGGAAIGERAASRWLNIVPWGIRKLARYVKDKYGNPPVIITENGMDDPNKRFMTLEEALQDDKRIRFHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDYKSNLTRIPKASVQWFKGMLRLKTETNNLI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01852 504 PRINTS Glycosyl hydrolase family 1 signature 467 479 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 PRINTS Glycosyl hydrolase family 1 signature 320 334 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 PRINTS Glycosyl hydrolase family 1 signature 398 406 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 PRINTS Glycosyl hydrolase family 1 signature 421 432 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 PRINTS Glycosyl hydrolase family 1 signature 443 460 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 29 43 IPR033132 -
Bva07g01852 504 PANTHER BETA-GLUCOSIDASE 41-RELATED 11 494 - -
Bva07g01852 504 SUPERFAMILY (Trans)glycosidases 19 494 IPR017853 -
Bva07g01852 504 Pfam Glycosyl hydrolase family 1 23 495 IPR001360 GO:0004553|GO:0005975
Bva07g01852 504 Gene3D Glycosidases 12 495 - -
Bva07g01852 504 PANTHER GLYCOSYL HYDROLASE 11 494 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01852 Bva-Chr7 16747200 16750635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01852 17 440 Glycoside Hydrolase AT5G54570 75.765 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01852 K01188 - gmx:100783543 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01852 07 16747200 16750635 Bva07g01852 07 16747200 16750635 ECH