Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01846 ATGGATTTGCTGTGTCACGCATACTCGAACAACTCAGACGACGATGAACAAGAACCGAAACGACATAAAGTTGCCCCTTCTCCCTCGAACCCGCCAAATCCAAAACCCTATTTTCCTGATCCTCCTCCTCGTTCCAACCAGTCCGTGGACTTTCAAGCACAAGCTCCGCTTCCTGGAAGATACATTTCCAAGCGACAACGAGCACTCTTAGTTCCTGTCGCCACTGTTTCTGACCCCGTTCCGGTTACATCTTCCTACACAGCATCTGGAAGCATTTCAGATACTGGTCTACCTCATGACATTTTATCATTGTTGAGAAATAAGGCAAAGGGTCATCTAAACCTAAAGCAATTACCTGAAAAGCTGTCTGTGGCTCTATATGGCCATACAAAAGCTGTGAATGCCATACATTGGTCATCTACTCATGCTCATCTCCTTGCTTCTGCTGGGATGGATCACATGGTTTGCATATGGAATGTATGGAGCAGAGATCAGAAGAAAGCACATGTgctaaattttcataatgcAGCAGTGAAAGATATAAAATGGTCTCAGCAAGGACtctttttgctttcttgtGGATATGATTGCACATCAAGGTTGGTTGATGTTGAGAAGGGACTGGAGACTCAAGTTTTCAGTGAAGACCAAGTAGTTGGAGTTATCAAGTTCCATCCTGACAATCCAAACCTCTTTCTTTCTGGTGGATCAAAGGGCCTTATGAGATTATGGGATATCAGAACTGGAAAAGTAACCCATAACTATAACCGAAGTTTAGGTCCAATTCTGGATGTTGAGTTTACTATCAATGGGAAGCAGTTCATTTCTTCAAGTGATGTATCTGGGAGCAATGTCAGTGAGCATTCTATTATTGTTTGGGATGTGTCAAGACAGGTTCCATTGTCCAATCAGGTTTATGTGGAAGCTTATACCTGTCCCTGTGTAAGGCGCCACCCATTTGACTCAAATTTTGTTGCCCAATCAAATGGAAACTATATTGCAATCTTCTCTGCCTCCCCACCTTTCAGGCTCAACAAGTACAAGCGCTATGAGAGCCATGAGGTGTCTGGGTTTCCAATTAAGTGCAATTTCAGCTTGGACGGGAAGAAGCTTGCCTCTGGCTCCTCAGATggttccatttatttttatgattaccAGTCATCCGAGGTTGTTAGGAAAATGAAGGCCTATAATCAAGCATGCATTGATGTTGTTTTCCACCCTGTTATTCCTAACGTCATTGCTTCGTGCTCGTGGGATGGAAGCCTTTCAGTATTTGAATA 1283 0.4186 MDLLCHAYSNNSDDDEQEPKRHKVAPSPSNPPNPKPYFPDPPPRSNQSVDFQAQAPLPGRYISKRQRALLVPVATVSDPVPVTSSYTASGSISDTGLPHDILSLLRNKAKGHLNLKQLPEKLSVALYGHTKAVNAIHWSSTHAHLLASAGMDHMVCIWNVWSRDQKKAHVLNFHNAAVKDIKWSQQGLFLLSCGYDCTSRLVDVEKGLETQVFSEDQVVGVIKFHPDNPNLFLSGGSKGLMRLWDIRTGKVTHNYNRSLGPILDVEFTINGKQFISSSDVSGSNVSEHSIIVWDVSRQVPLSNQVYVEAYTCPCVRRHPFDSNFVAQSNGNYIAIFSASPPFRLNKYKRYESHEVSGFPIKCNFSLDGKKLASGSSDGSIYFYDYQSSEVVRKMKAYNQACIDVVFHPVIPNVIASCSWDGSLSVFE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01846 427 MobiDBLite consensus disorder prediction 9 23 - -
Bva07g01846 427 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 126 160 - -
Bva07g01846 427 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 427 - -
Bva07g01846 427 SUPERFAMILY WD40 repeat-like 110 426 IPR036322 GO:0005515
Bva07g01846 427 Gene3D - 105 427 IPR015943 GO:0005515
Bva07g01846 427 ProSiteProfiles Trp-Asp (WD) repeats profile. 126 168 IPR001680 GO:0005515
Bva07g01846 427 MobiDBLite consensus disorder prediction 1 50 - -
Bva07g01846 427 ProSiteProfiles Trp-Asp (WD) repeats profile. 212 254 IPR001680 GO:0005515
Bva07g01846 427 MobiDBLite consensus disorder prediction 25 43 - -
Bva07g01846 427 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 393 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 387 427 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 248 294 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 119 159 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 206 245 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 343 384 IPR001680 GO:0005515
Bva07g01846 427 SMART WD40_4 164 203 IPR001680 GO:0005515
Bva07g01846 427 Pfam WD domain, G-beta repeat 126 159 IPR001680 GO:0005515
Bva07g01846 427 Pfam WD domain, G-beta repeat 168 201 IPR001680 GO:0005515
Bva07g01846 427 Pfam WD domain, G-beta repeat 350 384 IPR001680 GO:0005515
Bva07g01846 427 ProSitePatterns Trp-Asp (WD) repeats signature. 146 160 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01846 Bva-Chr7 16699440 16704211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01846 129 296 Miscellaneous Gene Families AT5G08390 21.637 1.12e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01846 K24742 - gmx:100790592 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01846 07 16699440 16704211 Bva07g01846 07 16699440 16704211 ECH