Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01838 ATGGCGGCACAAAACCCACAAACCCATTTCGAGGATTACTTGCCTCTTATGGCCAACAAGCTTGGTGGGGATGGCCTAATAGACGAGCTCTGCAATGGGTTTAATCTATTGAAGGATTCTGAAAGAGGGGTCATCACTTTCGACAGCCTCAAGAGGAATTCCGCTTTGCTGGGGCTACAGGGCTTGAGCGATGAGGATCTTCACTCCATGTTAAGAGAAGGTGATTTTGACGGTGATGGAGCTCTCAGCCAGATGGAATTCTGCGTCTTGATGTTCAGATTGAGCCCTGAGCTTATGGAGGGGTCAAAATTGTGGTTAGAGGAAGCCCTTGAACAGGAACTGAAAGattctttctg 356 0.4691 MAAQNPQTHFEDYLPLMANKLGGDGLIDELCNGFNLLKDSERGVITFDSLKRNSALLGLQGLSDEDLHSMLREGDFDGDGALSQMEFCVLMFRLSPELMEGSKLWLEEALEQELKDSF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01838 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 117 - -
Bva07g01838 118 SUPERFAMILY EF-hand 5 91 IPR011992 -
Bva07g01838 118 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Bva07g01838 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Bva07g01838 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 117 IPR044205 GO:0005509
Bva07g01838 118 Gene3D - 7 117 - -
Bva07g01838 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01838 Bva-Chr7 16637253 16638401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01838 4 114 EF-hand Containing Proteins AT4G27280 65.179 2.54e-49 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01838 K24345 - gmx:100500465 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01838 07 16637253 16638401 Bva07g01838 07 16637253 16638401 ECH