Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01837 ATGGGCAGTTTCAAAAGGCTCGCTGTGTACTCCTTGTTATTATCCTTCATACGCATCTCCTCCACACTGAGCATACTTACCCCAACCCAACCCATACGAGATGGCACAAATGAGACTCTGGTTTCAGCAGGTGGAACCTTTGAAGCAGGTTTCTTCAGCATCTCAAATTCAAAGAGCCATTACGTCGGAATTTGGTACAAGAGCATCTCTCCTAGAACAGTTGTATGGGTAGCCAACAGAGAAGAACCGCTCACCGACTCCTCAGGTGTTTTCCAAGTAAATAGTGATGGTCTCAGTATTATTAACAGCCGAGGGGGTAGAATTTGGTCTTCAAATCTAtcaaaaacaatagaaaaaccGGTTGTGCAGCTATTAGAATCAGGAAACCTTGTTGTGAAAGATAGACAAAACTTGGAGAGCATTTTGTGGCAGAGCTTCGATCATCCTGGTGATACTTTTCTCCCTGGTATGAAACTTGGAAGAAACTTTAAAACAGGACAGTCTTTGGCTCTGACATCTTGGAAAAACCTGGATGATCCTAGTCCAGGTGAATTTTCTATGGGAATAGACACTCATGGGCTTCCTCAACTTGTTGTCACAAAGGGAGGAAGCACTGTCTATAGAGCAGGGTCATGGAATGGGCTTAGTTTTACAGGAACCCCTACTCTAAATTACTCATAcatgaaatttgtttttgtgcttaatgaagaagaagtcttctatgaaaatgaaatcctAAATAGTTCAATTCTCATGAGAAGCAGGCTGACCCCAGAAGGTTATCCATTTCGTCTCACATGGTCAAACCAGAAAACAAGCTGGGACACTCACTACTCCAGCAATATGGACGAGTGTGAAAATTATGGCTTGTGTGGTGCAAATACTAATTGCAATCCAAGGGGCACGAAAGTTTGTGAGTGCTTGACAGGATTCACagccaaatctcaagattCAAATGGTTCGTTTGGTGGGTGTGGTCGAACAACCCAGCAGGTTTGTAATAAGGGAGATAGATTTCAAAAGTATGAGGGGAAGAAACTGCCAGATACATCTTCTTCCTGGTATGATAAGACTATCAGCTTACGGGAATGTGAGAAATTATGCTTGAGTAACTGCTCTTGCACAGCCTATGCTAACTTGAATATCAGTGGCGGTGGAAGCGGCTGCTTGCATTGGTTCGATTACATAATGGACATGAGAGAACTCCCTGAAGGAGGACAAGACTTCTATCTAAGATTGCTTGCAGGTTCGGaactaaatattatttcatctttCCATATGACTCTTGCTTTTTCGTCATGCTTCAGCTA 1310 0.4 MGSFKRLAVYSLLLSFIRISSTLSILTPTQPIRDGTNETLVSAGGTFEAGFFSISNSKSHYVGIWYKSISPRTVVWVANREEPLTDSSGVFQVNSDGLSIINSRGGRIWSSNLSKTIEKPVVQLLESGNLVVKDRQNLESILWQSFDHPGDTFLPGMKLGRNFKTGQSLALTSWKNLDDPSPGEFSMGIDTHGLPQLVVTKGGSTVYRAGSWNGLSFTGTPTLNYSYMKFVFVLNEEEVFYENEILNSSILMRSRLTPEGYPFRLTWSNQKTSWDTHYSSNMDECENYGLCGANTNCNPRGTKVCECLTGFTAKSQDSNGSFGGCGRTTQQVCNKGDRFQKYEGKKLPDTSSSWYDKTISLRECEKLCLSNCSCTAYANLNISGGGSGCLHWFDYIMDMRELPEGGQDFYLRLLAGSELNIISSFHMTLAFSSCFS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01837 436 CDD B_lectin 35 149 IPR001480 -
Bva07g01837 436 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Bva07g01837 436 ProSiteProfiles Zinc finger SWIM-type profile. 357 400 IPR007527 GO:0008270
Bva07g01837 436 CDD PAN_AP_plant 325 413 - -
Bva07g01837 436 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Bva07g01837 436 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Bva07g01837 436 Pfam S-locus glycoprotein domain 207 314 IPR000858 GO:0048544
Bva07g01837 436 PANTHER - 8 420 - -
Bva07g01837 436 Gene3D Hepatocyte Growth Factor 330 411 - -
Bva07g01837 436 SMART blect_4 29 149 IPR001480 -
Bva07g01837 436 SMART ntp_6 334 413 IPR003609 -
Bva07g01837 436 PANTHER - 8 420 - -
Bva07g01837 436 Gene3D - 19 146 IPR036426 -
Bva07g01837 436 PIRSF SLG 4 429 IPR035446 -
Bva07g01837 436 Pfam PAN-like domain 333 399 IPR003609 -
Bva07g01837 436 Pfam D-mannose binding lectin 73 175 IPR001480 -
Bva07g01837 436 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 180 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01837 Bva-Chr7 16631972 16634262 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01837 - - vun:114170595 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01837 07 16631972 16634262 Bva07g01837 07 16631972 16634262 ECH