Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01831 ATGGAACTAGAATATGGTTGGCATTTTCAGGACTACTTTCCTTCCATGATTGCGCGTATGGGCGCGGAGGGATTCATAGGGGAGCTCATCAACGGGTTTCGTTTGCTGATGGATGTGAACAAGGGTTTGATCACGTTCGAGAGCTTGAAGATGAACAGCTTCTTGCTCGGAGTGGACAACATGGGGGACGACGAGATCGTGTACATGTTAATGGAAGGTGATTTGGATGGAGATGGTGCTCTGAGCCAAATGGAGTTCTGCATTCTCATGTTCAGGTTGAGTCCTGGTTTGATGATGGATGGTCCTAATATTACGAATATTAATGGAGGATGCTA 335 0.4627 MELEYGWHFQDYFPSMIARMGAEGFIGELINGFRLLMDVNKGLITFESLKMNSFLLGVDNMGDDEIVYMLMEGDLDGDGALSQMEFCILMFRLSPGLMMDGPNITNINGGC 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01831 111 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 5 101 - -
Bva07g01831 111 Gene3D - 7 106 - -
Bva07g01831 111 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Bva07g01831 111 PANTHER CALCIUM-BINDING PROTEIN KIC 5 101 IPR044205 GO:0005509
Bva07g01831 111 Pfam EF-hand domain pair 41 92 IPR002048 GO:0005509
Bva07g01831 111 SUPERFAMILY EF-hand 23 96 IPR011992 -
Bva07g01831 111 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01831 Bva-Chr7 16586261 16586982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01831 8 98 EF-hand Containing Proteins AT5G54490 59.783 4.26e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01831 K24345 - gmx:100794479 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00783 09 4028028 4028553 Bva07g01831 07 16586261 16586982 BWGD
Bva07g01831 07 16586261 16586982 Bva07g01831 07 16586261 16586982 ECH