Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01797 ATGACATGGGATCATCAAAATGCTGATATTGTTTGTCAACTCTTTGGGGTTTGCTGTAAGCTTGTGTTGCGTAACatgaaattgacaaaaaagaaaagaaagcaagatGGGAGTGGGGAGCGGTGGCTACCGCCCCAATCTCAGGGACCGAGAAGGACTATTAGGCGAAGAACATCATTAAGGCTGAAATTTTGGTTTGAGAGAACCCAGATTGGAATAATGGAAACTCCACCTTCTGATAAATCAATTTCCAAGCGGTcgttaagaaaaaaatcggGCTCACGAAACTATGATGAGAATCTTATGGATGAAATTTTTGAGGAACATTTAGGTGTGGCcttgaagaagaagcataAAACTAAGCAAGATTTGGAGAAGGAGACCGAAATTGAGGCTATGATATCCTTTTCAGTTGGGTTCCCAATTGATGCATTGCGTGAGGATGAAATTAGAGCTGGTGTTGTAAGAGAATTGGGTGGAAAGGAGCAGAATGACTATATTGTTATAAGGAATCATATATTGGCTAAATGGAGGGGTAATGTACGGAAGTGGCTAACAAAAGGAGAGATTAGGGAAACTGTGAGCGCTGAGTATGAACATTTGATAAGTTCTGCATATGACTTTCTTTTGTATAATGGTTACATAAATTTTGGGGTTTCTCCATCATTTACCTCTCACATGCCTGAGGCAACTGAAGGGAGTGTGATTATTGTTGGTGCTGGCCTTGCTGGTTTAGCAGCAGCAAGGCAGCTCTTGTCATTTGGTTATAAGGTAGTGGTTCTAGAAGGTAGGAACCGACCTGGTGGGAGGGTTTATACTCAAAAGATGGGATGTGAGGGTAAATTTGCTGCTGTGGATCTTGGAGGGAGTGTTATCACTGGCATTCATGCTAATCCTCTGGGAGTTCTTGCTCGGCAGCTTTCTATACCACTTCATAAAGTCAGAGATAATTGCCCTTTATACAAGCCAGATGGGGCGCCGGTTGATAAGGAAATGGATTCTGACAtagaattcatttttaataaattgctTGACAAAGTCATGGAACTAAGGCAAATTAAGGGTGGGTTTGCCAATGATATCTCTCTTGGTTCAGTCCTGGAGACACTTAAAATGCTTTACGCTGTGGCTAGAAATCCTGACGAGAGGCAATTGCTTGATTGGCATCTTGCCAATTTGGAATATGCAAATGCTGGATGTCTGTCGAATCTGTCAGCTGCCTATTGGGATCAGGATGATCCTTATGAAATGGGTGGTGATCACTGCTTTCTTGCTGGAGGTAATTGGAGATTGATTAAAGCATTAAGTGAAGGAGTTCCTATTTTCTATGGAAAGACTGTCAATACTATTAGATACGGCAATAATGGTGTTGAAGTTATTGCTGGAGATCAAGCCTTTCAAGCAGATATGGTCTTATGCACCGTGCCTCTTGGAGTTCTAAAAAGGAAAGCAGTCAGTTTTGAACCTGAATTACCATCAAGAAAGCTGGCAGCAATAGAGAGACTGGGTTTTGGGCTTCTAAACAAGGTTGCCATGGTTTTTCCTTATGTCTTTTGGGGGGAAGATCTGGACACATTCGGATGTCTCAATGAACACAGTCATAAGCGTGGAgaattcttcttattttacaGTTACCATACGGTTTCTGGAGGTCCAGCACTTATTGCATTAGTAGCTGGTGAAGCTGCACAAACATTTGAATATACAGATCCATCCTTTTCGCTCCATCGTGTTTTGTCAGTCCTCAGAGGTATTTATAACCCTAAAGGCATCATTGTGCCTGATCCAATACAGACAATTTGTACAAGATGGGGCAGTGATCCACTTTCTTATGGATCCTACTCTCATGTTAGTGTACAATCATCTGGCAGTGATTATGATATACTAGCGGAAAGCGTAGGGAGCCGGCTGTTCTTTGCTGGCGAGGCTACAAGTAGGCAATATCCAGCCACTATGCACGGTGCTTTCTTAAGTGGCTTGAGAGAAGCTGCACGCATTTACCAAACAACCCAGGTTCGGCAAAATAATCCTAGGAAGTACATGCTGAGGAATATCGGATCAAGCAATGATATAGTAGTAGATCTATTCAAGAAGCCTGATCTGGAACTTGGTAAGCttgcttttatatttgatcCTTCATCACAAGGTCCGCAGTCAATGGGGCTAATGCAAATAACTTTTGGGAGTAGCGAAGAATCTCACTTGGAGGAATTATCAGAACTGAATCCCATTAAACTGCCATTGCAGCTTTACACTATTATATCTCGAGAACAGGCATACCAACTGCAACTGATTACAGGAGGGGATGAATGTAGGCTGTCATATGTGACGAAAAACATAGGCTTGAAGCTTATGGGATCTAATGCTTTAGTCAATATAGGTAACTCATTAATTGCTAGCATTACAAGCGCGCGACGAGGAAGAGGTAGAAACAGGTTACCTATTGAGCAACACCATATACCATA 2465 0.4049 MTWDHQNADIVCQLFGVCCKLVLRNMKLTKKKRKQDGSGERWLPPQSQGPRRTIRRRTSLRLKFWFERTQIGIMETPPSDKSISKRSLRKKSGSRNYDENLMDEIFEEHLGVALKKKHKTKQDLEKETEIEAMISFSVGFPIDALREDEIRAGVVRELGGKEQNDYIVIRNHILAKWRGNVRKWLTKGEIRETVSAEYEHLISSAYDFLLYNGYINFGVSPSFTSHMPEATEGSVIIVGAGLAGLAAARQLLSFGYKVVVLEGRNRPGGRVYTQKMGCEGKFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGAPVDKEMDSDIEFIFNKLLDKVMELRQIKGGFANDISLGSVLETLKMLYAVARNPDERQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLIKALSEGVPIFYGKTVNTIRYGNNGVEVIAGDQAFQADMVLCTVPLGVLKRKAVSFEPELPSRKLAAIERLGFGLLNKVAMVFPYVFWGEDLDTFGCLNEHSHKRGEFFLFYSYHTVSGGPALIALVAGEAAQTFEYTDPSFSLHRVLSVLRGIYNPKGIIVPDPIQTICTRWGSDPLSYGSYSHVSVQSSGSDYDILAESVGSRLFFAGEATSRQYPATMHGAFLSGLREAARIYQTTQVRQNNPRKYMLRNIGSSNDIVVDLFKKPDLELGKLAFIFDPSSQGPQSMGLMQITFGSSEESHLEELSELNPIKLPLQLYTIISREQAYQLQLITGGDECRLSYVTKNIGLKLMGSNALVNIGNSLIASITSARRGRGRNRLPIEQHHIP 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01797 821 ProSiteProfiles SWIRM domain profile. 125 226 IPR007526 GO:0005515
Bva07g01797 821 Pfam SWIRM domain 140 217 IPR007526 GO:0005515
Bva07g01797 821 Gene3D - 235 665 IPR036188 -
Bva07g01797 821 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 109 808 - -
Bva07g01797 821 SUPERFAMILY FAD-linked reductases, C-terminal domain 503 616 - -
Bva07g01797 821 MobiDBLite consensus disorder prediction 30 53 - -
Bva07g01797 821 Gene3D - 131 228 IPR036388 -
Bva07g01797 821 SUPERFAMILY FAD/NAD(P)-binding domain 230 668 IPR036188 -
Bva07g01797 821 Pfam Flavin containing amine oxidoreductase 242 666 IPR002937 GO:0016491
Bva07g01797 821 PANTHER FLAVIN MONOAMINE OXIDASE 109 808 - -
Bva07g01797 821 SUPERFAMILY Homeodomain-like 127 226 IPR009057 -
Bva07g01797 821 Gene3D - 317 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01797 Bva-Chr7 16402101 16406107 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Bva07g01797 Amino_oxidase 2.3e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01797 - - jre:108993169 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01797 07 16402101 16406107 Bva07g01797 07 16402101 16406107 ECH