Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01787 ATGGCGTCCGTCCATAGTACTATCGCTCCTGAGAGCTTTCTATCCCTCTCCAAAAGCAAATACAAATCCAAACCCATGAATCCTCATGCGAAATCTATGCCCACCACAAATTTCCTGGGCTCAAAGCTTTCTCGGAACCCAGTTTTCTCGAGTGCCAAACCGAGAGGCAACTGGGTTGTGGTGAACTCAGCAGTGGATGATTTGGACGTAATCCCCGTACAGAGTGGTGATAGTACGGACCAGCAAGAAGGCCTGGTGGTGACGCGGGTCGAGATGGAAGTAGGGGATGGGGAATTGGCGACTCAAGTGGCTGGATTTGGGAATGAGGGGCGTTTATCCTTCGAAGGTGCTGCTGACTTTCCAGGATTCTCGTCTTCTTCAGCTTCAATTGGGGATGGAAGCGGGGGAGAGACCAATGAAATGAATAGGCTAATAGATAGGACCATCAATGCCGCTATTGTGCTTGCGGCGGGTACTTTTGCCATCACAAAGCTGCTTACCATTGATAGTGATTACTGGCATGGATGGACACTCTTTGAGATATTAAGATATGCACCTCAGCATAACTGGTCTGCTTATGAGGAAGCTCTTAAGACTAATCCTGTTTTAGCCAAAATGATGATCAGTGGAGTCGTCTACTCTATAGGGGACTGGATTGCACAGTGTTTTGAAGGAAAACCTATATTTGAGTTTGACCGTGCACGGATGTTCAGATCGGGTCTTGTTGGTTTTACTCTACATGGTTCCCTTTCTCATTACTATTACCAGTTTTGTGAGGAGCTATTTCCTTATCAAGAGTGGTGGGTAGTTCCTGCTAAAGTTGCCTTTGACCAAACTGCATGGTCAGCAGTTTGGAACACCATTTATTATGTGGTCGTGGGATTTCTCCGTCTTGACTCtcccattaatatttttaatgaactGAAGGCAACATTTTTTCCTATGCTTACTGCTGGGTGGAAGCTATGGCCATTTGCTCACCTCATTACTTATGGTGTGATCCCAGTGGAGCAAAGGCTTCTCTGGGTAGACTGCGTAGAGCTGGTTTGGGTGACAATACTATCGACttattcaaatgaaaaatcagaAGCAAGAAACGCTGAGGTACCTGCAGAAGTGAAGTCCACTCAGGAgta 1136 0.4507 MASVHSTIAPESFLSLSKSKYKSKPMNPHAKSMPTTNFLGSKLSRNPVFSSAKPRGNWVVVNSAVDDLDVIPVQSGDSTDQQEGLVVTRVEMEVGDGELATQVAGFGNEGRLSFEGAADFPGFSSSSASIGDGSGGETNEMNRLIDRTINAAIVLAAGTFAITKLLTIDSDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVLAKMMISGVVYSIGDWIAQCFEGKPIFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYQEWWVVPAKVAFDQTAWSAVWNTIYYVVVGFLRLDSPINIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELVWVTILSTYSNEKSEARNAEVPAEVKSTQE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01787 378 Pfam Mpv17 / PMP22 family 295 355 IPR007248 GO:0016021
Bva07g01787 378 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 46 375 IPR007248 GO:0016021
Bva07g01787 378 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 46 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01787 Bva-Chr7 16353014 16356670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01787 193 363 Miscellaneous Gene Families AT2G14860 27.485 4.18e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01787 K13348 - tcc:18593857 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01787 07 16353014 16356670 Bva07g01787 07 16353014 16356670 ECH