Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01780 ATGCATCGTTCTGTGGCGACAACGGCAATGAACTTGCAACGTAAGTTTTTGAGCCAAAATAGGCTAAACCAGATGATGGCAGCGAAAAGGGTTATGAAGCCCTGCGATGTGTTCATCAATCACAGAAGCATAGACACGAAAAGAACAGTGGCTAGTTTACTATACGACCATCTTCGCAGGTTCAATCTGCGTCCTTTCTTGGACAACAAGACCATGAAGCCAGGAGACAAactgtttgataaaattaacagTGCAATCCTCGAGTGTAAGATTGGTGTGGCTATTCTGTCACCAACGTATTGTGAGTCATATTTTTGCCTTCACGAGCTTGCTCTTCTCATGGAGACCAAGAAGAAGGTGATTCCTATCTTCTGTGATGTCAAGCCGTCTCAATTGCGTATCGCCAATGATGGAAAATTATCTGCCGAGGAGATTAAGAGGTTCAACTGGGCTCTTCAAGAGGCCAAATATACCGTAGGACTCACGTTCAATTCCTCTAAAGGGAACTTCTCGGACATTGTAACAAGTTCTAGTGATATCATTATCAACAGCATGATAGAGCTTCAGAACGAAGAGGAGATGGAGGGTCAAAACTTGGCAATTGCTCTTTA 611 0.4239 MHRSVATTAMNLQRKFLSQNRLNQMMAAKRVMKPCDVFINHRSIDTKRTVASLLYDHLRRFNLRPFLDNKTMKPGDKLFDKINSAILECKIGVAILSPTYCESYFCLHELALLMETKKKVIPIFCDVKPSQLRIANDGKLSAEEIKRFNWALQEAKYTVGLTFNSSKGNFSDIVTSSSDIIINSMIELQNEEEMEGQNLAIAL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01780 203 PANTHER COP1-INTERACTING PROTEIN-RELATED 29 196 - -
Bva07g01780 203 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 155 IPR035897 -
Bva07g01780 203 ProSiteProfiles TIR domain profile. 33 156 IPR000157 GO:0007165
Bva07g01780 203 SMART till_3 34 167 IPR000157 GO:0007165
Bva07g01780 203 Pfam TIR domain 36 133 IPR000157 GO:0007165
Bva07g01780 203 Gene3D - 4 155 IPR035897 -
Bva07g01780 203 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 29 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01780 Bva-Chr7 16318354 16319144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01780 37 196 Miscellaneous Gene Families AT1G57670 31.461 3.28e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01780 - - pop:18095619 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01780 07 16318354 16319144 Bva07g01780 07 16318354 16319144 ECH