Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01777 ATGAGCAAAAACGGGGACGAAGAAGACGAAGAGGAGTGCTTCTACGAGTCCCACGATCGCCTTGTTTCATCGTCTTGTTCCTGTTCTACTTCAAACTCCGACGACGAGAACGACTCCAATTCCTATTCTCCTTCTCCGAATTATGGGTCGGACCAACCGTTTCCTGTGCCCAAATTCCCAGTTGCCATGTGCAGGTACGACATATGGATCTCCGAACCCTCCTCGGTGTCTGAACGTCGGACCAGACTCCTCCGCGAGATGGGTCTTAGTGGCGACCCATCATTGTCCCGAGGGAAGCCTTCTTCCGCTGGTGATCTTAAAGAAGTGGGCAATGGAGAATTTAGTCGATCGGCGTCGTCTGATCACTTGACACGGCAACAACCGGGTGAGAGTTCCAGTGGTTCCGCTGCCATAGTCCGATCGAAATCCGACGGGGCGGCGGATCACAACAACGTTTCATTGTGTGGTCAGTCTCATGATCATTGTAATAAGtgttcttcctcttcttcgtGTTTTTGTTcgttttcttcaattctttctaTTCATTCGGTCGCAACAGAGACCGGCTCATTTGTAAATAACCGTAATCGTGTTGTTAAGTCAAAGTGTGGTAATGGCAATGGATCCCCAGTTGCTAGTGCCGCTTCTCCCAATAAGCCGCCTTCGgggaaaaattgtaaaagggTGGATGAAATTCGATGTGACTGCTCCAAGTTGAGTATGGATTTCAGTCATAGTTCGGTGGTGCCAGTTTCAGAGAATGCAGGTCCTGGAGAGGTGGAGGAAGGTCTGAACTGTAATGGGGTTGACATGGTCAATCAACAAGTCTGCACAATAAGAGATCTTGATAATGGCAAAGAGTTTGTCGTGAATGAGATTAGGGAAGATGGCATGTGGAACAAACTCAAGGAAGTGGGAACTGGAAGGCAGTTGACTATGGAGGAATTTGAGATGACAGTTGGGCACTCACCCATCGTTCAAGAATTAATGCGACGGCAAAACGTTGAGGAGGGTAATAAAGATAATGGAGATTCAAATGCAGATGGTGGAAGTGGAGGCAGTTCCAAGCTCAAGAAGAAAGGGGGATGGTTGAAGAGTATAAGGAGTGTAGCAAGCACCATGACTGGTCATAAAGAGAGACGTAGTGGTGATGAAAGGGATACCTCGTCAGAGAAGGGTGGGCGGAGATCAAGCTCTGCAACAGATGATAGCCAGGATGCCTCTTTTCATGGGCCTGAGAGAGTAAGGGTCAGGCAGTATGGAAAGTCTAGCAAAGAGATTACAGCACTCTTTAAAAGCCAGGAGATACAGGCTCATAATGGATCTATATGGACCATTAGGTTTAGTTTGGATGGAAAATATCTTGCCAGTGCAGGTGAGGATTGTGTAATTCATGTCTGGCAAGTTGTGGAGTCAGAGAGGAAGGGGGAGCTGCTAATGGAGAAACCAGAAGATGGGAGTATGAATATGTTGTTTGTTATGAATGGATCACCAGAACCAACTCTACTGTCCCCTATGATGGACAACCATCCTGACAAGAAGAGAAGGGGGAGGTCATCGATAAGTAGAAAATCATTGAGCTTGGAACAACTAATGGTGCCGGAAACTGTGTTTGGTCTTGCAGAGAAACCCATTTGCTCATTCCAAGGCCATCTTGATGATGTGCTTGACCTTTCTTGGTCCAAGTCTCAGcACTTGCTTTCATCCTCAATGGACAAAACTGTGCGGCTATGGCACTTGTCTAGCGAGTCTTGTTTGAAAGTCTTTTCACACAGTGACTTTGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGCGGATCTTTGGACGCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTCGACTGGATTGATTTGCATGAGATGGTTACTGCTGCTTGCTACACACCTGATGGTCAGAGTGCACTAGTGGGTTCATACAAGGGTAGCTGCCATTTATATGATACATCTGAGAATAAGTTGCAACAGAAAAGTGAGATCAATCTgcagaacaagaaaaaaaagtccCATCACAAGAAAATTACTGGCTTCCAGTTCGCCCCAGGAAGTTCATCAGAAGTACTCATTACATCTGCCGATTCACGGATTCGGGTTGTTGATGGCGTTGATCTGGTTCATAAGTTCAAAGGGTTTCGTAACCCAACCAGCCAAATGTCAGCCTCCCTGACAGCAAATGGTAAATATATTGTCTCAGCAAGCGAGGATTCCCATGTATACATATGGAAAAATGAAGCGGATTGCAGGCCAAACAGAAGCAAAGGTGTCACTGTTACACAATCGTACGAACATTTTCACTGTAAAGATGTTTCGGTGGCGATCCCTTGGCCTGGCATGGGGGATACGTGGGGAATGCACGATCGTTTATCTGGAGAACAAACCGGAGCTGATAGTAACTTGGATGAGGTGTTGTCAGCAAATCATCCTCCTACCCCGGTGGAGGAATTTGGTACGGACGGTTCACGATCTGCAACTGGCTGCAACAATAGTCCACTTCATGCGACCATTGCTAGCGCCACAAACAGTTACTTCTTCGATCGAATTTCAGCGACATGGCCAGAGGAAAAACTCGTTGTAGCCGCAAGGAATCGAAGTCCTCGAGTGAGCATGGATATCTCAGCTGGGTTAAGTCAAAACATGTCAGCCTGGGGCATGGTCATTGTAACTGCCGGTCTAAGAGGAGAAATTAGAACTTTCCAAAATTTTGGATTGCCACTGATATG 2762 0.4518 MSKNGDEEDEEECFYESHDRLVSSSCSCSTSNSDDENDSNSYSPSPNYGSDQPFPVPKFPVAMCRYDIWISEPSSVSERRTRLLREMGLSGDPSLSRGKPSSAGDLKEVGNGEFSRSASSDHLTRQQPGESSSGSAAIVRSKSDGAADHNNVSLCGQSHDHCNKCSSSSSCFCSFSSILSIHSVATETGSFVNNRNRVVKSKCGNGNGSPVASAASPNKPPSGKNCKRVDEIRCDCSKLSMDFSHSSVVPVSENAGPGEVEEGLNCNGVDMVNQQVCTIRDLDNGKEFVVNEIREDGMWNKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEGNKDNGDSNADGGSGGSSKLKKKGGWLKSIRSVASTMTGHKERRSGDERDTSSEKGGRRSSSATDDSQDASFHGPERVRVRQYGKSSKEITALFKSQEIQAHNGSIWTIRFSLDGKYLASAGEDCVIHVWQVVESERKGELLMEKPEDGSMNMLFVMNGSPEPTLLSPMMDNHPDKKRRGRSSISRKSLSLEQLMVPETVFGLAEKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSESCLKVFSHSDFVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQSALVGSYKGSCHLYDTSENKLQQKSEINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRNPTSQMSASLTANGKYIVSASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDTWGMHDRLSGEQTGADSNLDEVLSANHPPTPVEEFGTDGSRSATGCNNSPLHATIASATNSYFFDRISATWPEEKLVVAARNRSPRVSMDISAGLSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLI 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats profile. 436 477 IPR001680 GO:0005515
Bva07g01777 920 MobiDBLite consensus disorder prediction 203 220 - -
Bva07g01777 920 PRINTS G protein beta WD-40 repeat signature 608 622 IPR020472 -
Bva07g01777 920 PRINTS G protein beta WD-40 repeat signature 566 580 IPR020472 -
Bva07g01777 920 PRINTS G protein beta WD-40 repeat signature 455 469 IPR020472 -
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 588 622 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 502 521 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 20 49 - -
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats profile. 548 588 IPR001680 GO:0005515
Bva07g01777 920 Pfam WD domain, G-beta repeat 584 621 IPR001680 GO:0005515
Bva07g01777 920 Pfam WD domain, G-beta repeat 435 467 IPR001680 GO:0005515
Bva07g01777 920 Pfam WD domain, G-beta repeat 543 578 IPR001680 GO:0005515
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 436 469 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 87 143 - -
Bva07g01777 920 Gene3D - 371 502 IPR015943 GO:0005515
Bva07g01777 920 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 5 919 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 336 419 - -
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats profile. 588 622 IPR001680 GO:0005515
Bva07g01777 920 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 548 582 - -
Bva07g01777 920 PANTHER WD REPEAT DOMAIN 44 5 919 IPR040324 -
Bva07g01777 920 SMART WD40_4 624 662 IPR001680 GO:0005515
Bva07g01777 920 SMART WD40_4 669 714 IPR001680 GO:0005515
Bva07g01777 920 SMART WD40_4 541 579 IPR001680 GO:0005515
Bva07g01777 920 SMART WD40_4 715 756 IPR001680 GO:0005515
Bva07g01777 920 SMART WD40_4 429 468 IPR001680 GO:0005515
Bva07g01777 920 SMART WD40_4 582 621 IPR001680 GO:0005515
Bva07g01777 920 MobiDBLite consensus disorder prediction 203 226 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 1 54 - -
Bva07g01777 920 MobiDBLite consensus disorder prediction 113 139 - -
Bva07g01777 920 SUPERFAMILY WD40 repeat-like 433 757 IPR036322 GO:0005515
Bva07g01777 920 Gene3D - 527 781 IPR015943 GO:0005515
Bva07g01777 920 MobiDBLite consensus disorder prediction 374 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01777 Bva-Chr7 16288645 16294096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01777 546 636 Acyl Lipid Metabolism Gene Families AT3G18860 29.126 6.30e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01777 K20241 - zju:107432447 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01777 07 16288645 16294096 Bva07g01777 07 16288645 16294096 ECH