Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01776 ATGGCTGCTACTTTGGTCCCCGCTGCTCTCTGTATTCCTAAAGAGGGAAAGCCTAGTGTATCTCTCAAGGATTCGACCCTTTTTGGGGTTTCCTTGTCAGACCATCTCAAAGCTGACTTCAGCTCTTCTGCGTTGAGGTGCAAGAGGGAATTTGGAGCTGTGAGGGCTCAGACAGCGGCTACTACAACACCAGCAGTTGACAGATCTGCATCAGAAGGGAAGAAGACACTAAGAAAGGGCAGTGTTGTGATTACTGGTGCCTCCTCTGGATTGGGTCTTGCCACTGCAAAGGCATTGGCTGAGACTGGAAAATGGCATGTGATTATGGCCTGCAGGGATTTCCTCAAAGCCGAAAGAGCTGCAAAGTCTGTTGGCATGGCTAAGGAAAACTACACCATTATGCATTTAGACCTTGCCTCTCTTGACAGCGTTCGCCAATTTGTAGATAACTTCAGGCGATCAGAAAGGCCACTCGATGTGCTCGTTTGCAATGCTGCAGTTTATTTGCCAACTGCTAAGGAACCTACATTCTCTGCTGAAGGCTTTGAGCTTAGTGTTGGCACTAACCATCTTGGACATTTTCTCCTTTCACGTTTATTGATTGAGGACTTTAAAAAATCTGACTACCCATTAAAACGCCTGATCATCGTTGGATCAATAACAGGAAACACAAATACATTGGCTGGGAATGTGCCTCCCAAGGCCAACCTTGGTGACCTGAGGGGACTTGCTGGGGGATTGAACGGGCTAAACAGTTCGGCCATGATTGATGGAGGGGACTTTGATGGTGCCAAGGCTTACAAGGACAGCAAGGTCTGCAATATGCTCACCATGCAAGAGTTCCACAGAAGATACCATGAGGAAACTGGGATCACATTCGCTTCCCTTTACCCTGGTTGCATTGCTACAACAGGCTTGTTCAGAGAGCACATTCCTTTGTTCAGACTTCTCTTCCCTCCTTTCCAGAAGTACATAACCAAAGGCTATGTTTCAGAAGACGAAGCAGGAAAGAGACTTGCTCAGGTCGTAAGTGATCCAAGCTTGACGAAATCTGGTGTTTACTGGAGCTGGAACAAGGACTCAGCCTCATTTGAAAACCGGTTGTCCCAAGAGGCTAGCGATGCGGAGAAGGCACGCAAGGTTTGGGAGATCAGTGAGAAGCTCGTTGGTTTGGCCTA 1178 0.4779 MAATLVPAALCIPKEGKPSVSLKDSTLFGVSLSDHLKADFSSSALRCKREFGAVRAQTAATTTPAVDRSASEGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSVGMAKENYTIMHLDLASLDSVRQFVDNFRRSERPLDVLVCNAAVYLPTAKEPTFSAEGFELSVGTNHLGHFLLSRLLIEDFKKSDYPLKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENRLSQEASDAEKARKVWEISEKLVGLA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01776 392 Pfam short chain dehydrogenase 82 224 IPR002347 -
Bva07g01776 392 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 78 392 IPR005979 GO:0016630
Bva07g01776 392 PRINTS Glucose/ribitol dehydrogenase family signature 289 306 IPR002347 -
Bva07g01776 392 PRINTS Glucose/ribitol dehydrogenase family signature 81 98 IPR002347 -
Bva07g01776 392 PRINTS Glucose/ribitol dehydrogenase family signature 156 167 IPR002347 -
Bva07g01776 392 Gene3D - 69 392 - -
Bva07g01776 392 PANTHER - 3 391 IPR005979 GO:0016630
Bva07g01776 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 360 IPR036291 -
Bva07g01776 392 CDD LPOR_like_SDR_c_like 79 391 - -
Bva07g01776 392 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 3 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01776 Bva-Chr7 16285305 16287770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01776 K00218 - cit:102614959 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01776 07 16285305 16287770 Bva07g01776 07 16285305 16287770 ECH